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Schema
Citing CMDGA
Clear Filters
Annotation type
18
histone modifications
5
accessible chromatin
5
target gene predictions
2
gene expression
1
candidate regulatory elements
1
chromatin state
Annotation Category
2
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
Available data
2
tsv
1
bed bed9+
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
22
heart
20
kidney
19
brain
16
muscle of arm
15
lung
15
muscle of leg
14
placenta
14
stomach
13
large intestine
13
left lung
13
muscle of back
13
small intestine
11
cardiomyocytes
11
neural progenitor cell
11
right lung
11
thymus
10
H1-hESC
10
right kidney
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
islet of Langerhans
9
left kidney
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
8
EndoC_BH1
8
adrenal gland
7
left cardiac atrium
7
spinal cord
6
CD4-positive, alpha-beta memory T cell
6
T-helper 17 cell
6
adipocyte
6
embryonic stem cell
5
endothelial cell of umbilical vein
5
heart left ventricle
5
heart right ventricle
5
liver
5
pancreatic ductal cell
5
trophoblast cell
4
B cell
4
T-helper 1 cell
4
T-helper 2 cell
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
chorionic villus
4
foreskin keratinocyte
4
muscle of trunk
4
nephron progenitor
3
CD14-positive, CD16-negative classical monocyte
3
CD8-positive, alpha-beta T cell
3
S-shaped body
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
common myeloid progenitor, CD34-positive
3
effector memory CD8-positive, alpha-beta T cell
3
endothelial cell
3
fibroblast of lung
3
hepatocyte(AFP)
3
keratinocyte
3
kidney interstitial cell
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
regulatory T cell
3
retina
3
smooth muscle cell
2
22Rv1
2
CD8-positive, alpha-beta memory T cell
2
ESC derived cell line
2
HepG2
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T follicular helper cell
2
alternatively activated macrophage
2
astrocyte
2
bronchial epithelial cell
2
dermis lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
endodermal cell
2
epithelial cell of prostate
2
erythroblast
2
eye
2
fibroblast of cardiac tissue
2
fibroblast of dermis
2
foreskin fibroblast
2
gamma-delta T cell
2
germinal matrix
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hematopoietic multipotent progenitor cell
2
hepatocyte
2
kidney epithelial cell
2
left renal cortex interstitium
2
left renal pelvis
2
leukocyte
2
limb
2
mature natural killer cell
2
mature neutrophil
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesenchymal stem cell
2
monocyte
2
naive B cel
2
neural cell
2
neutrophil
2
osteoblast
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic stellate cell
2
renal vesicle
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
skeletal muscle tissue
2
skin fibroblast
2
spleen
2
temporal lobe
2
tongue
2
trophoblast
1
A673
1
AG04449 cell
1
AG04450 cell
1
B-1a B cell
1
BE(2)-C
1
BJ cell
1
BL-2 cell
1
CD14-positive monocyte
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CMK
1
CWRU1
1
DG-75 cell
1
DND-41
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM06990
1
GM08714
1
GM12864
1
GM12865
1
GM12891
1
GM12892
1
GM18507
1
H7-hESC
1
H9
1
HEK293
1
HEK293T
1
HK-2 cell
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
IMR-90
1
JVM-2 cell
1
K562
1
KARPAS-422 cell
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
MG63
1
NCI-H460 cell
1
NT2-D1 cell
1
PC-9
1
Panc1
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
SJCRH30
1
SK-N-MC
1
SUDHL5
1
T cell
1
U-266 cell
1
UCSF-4
1
WERI-Rb-1
1
WI38
1
Z-138
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aorta
1
aortic valve
1
arm bone
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
brain microvascular endothelial cell
1
cardiac atrium fibroblast
Life stage
adult
1
child
Date released
2
May, 2021
1
May, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
relevant_life_stage!
adult
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR271DAI
released
Annotation file set
: Chromatin state of CD8-positive, alpha-beta T cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR072FLD
released
Annotation file set
: GSE118165 gene expression annotation of normal CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR579KZW
released
Annotation file set
: GSE118165 gene expression annotation of LPS-stimulated CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP