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Schema
Citing CMDGA
Clear Filters
Annotation type
30
histone modifications
7
candidate regulatory elements
3
accessible chromatin
2
gene expression
1
chromatin state
1
target gene predictions
Annotation Category
2
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
Available data
2
tsv
1
bed bed9+
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
24
heart
20
stomach
19
brain
18
A549
17
lung
16
epithelial cell of proximal tubule
kidney
16
muscle of arm
15
adrenal gland
15
monocyte
15
muscle of leg
15
small intestine
14
glomerular endothelial cell
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
12
islet of Langerhans
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
neural progenitor cell
11
right lung
11
thymus
10
B cell
10
T-helper 1 cell
10
hepatocyte
10
regulatory T cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
H1-hESC
9
T-helper 17 cell
9
adipose tissue
9
extended pluripotent stem (EPS) cells
9
heart left ventricle
9
induced pluripotent stem cell
9
left kidney
9
liver
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
8
EndoC_BH1
7
CD8-positive, alpha-beta memory T cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mature neutrophil
7
spinal cord
7
spleen
6
K562
6
T-helper 2 cell
6
body of pancreas
6
embryonic stem cell
6
endothelial cell
6
glomerular visceral epithelial cell
6
heart right ventricle
6
kidney interstitial cell
6
mononuclear cell
6
tibial nerve
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
aorta
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
ovary
5
pancreatic ductal cell
5
sigmoid colon
5
temporal lobe
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
alternatively activated macrophage
4
angular gyrus
4
ascending aorta
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
caudate nucleus
4
cerebellum
4
chorionic villus
4
coronary artery
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
4
frontal cortex
4
gamma-delta T cell
4
gastrocnemius medialis
4
muscle of trunk
4
natural killer cell
4
nephron progenitor
4
omental fat pad
4
psoas muscle
4
retina
4
right atrium auricular region
4
right cardiac atrium
4
skeletal muscle tissue
4
subcutaneous adipose tissue
4
testis
4
thyroid gland
4
tibial artery
4
transverse colon
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
HeLa-S3
3
Peyer's patch
3
S-shaped body
3
adipocyte
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
layer of hippocampus
3
mammary gland epithelial cell
3
memory B cell
3
mesenchymal stem cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
osteoblast
3
pancreas
3
skeletal muscle myoblast
3
skeletal muscle satellite cell
3
substantia nigra
3
thoracic aorta
3
upper lobe of left lung
3
vagina
2
22Rv1
2
Ammon's horn
2
Brodmann (1909) area 46
2
KARPAS-422 cell
2
Kupffer cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T follicular helper cell
2
T47D
2
astrocyte
2
breast epithelium
2
bronchial epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
endodermal cell
2
epithelial cell of prostate
2
erythroblast
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
germinal matrix
2
hepatic stellate cell
2
keratinocyte
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
left cardiac atrium
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive B cel
2
neutrophil
2
occipital lobe
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic polypeptide-secreting cell
2
parathyroid adenoma
2
prostate gland
Life stage
1
child
Date released
2
May, 2021
1
May, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
3
AMP
RFA
3
AMP
biosample_term_name!
kidney
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR271DAI
released
Annotation file set
: Chromatin state of CD8-positive, alpha-beta T cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR072FLD
released
Annotation file set
: GSE118165 gene expression annotation of normal CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR579KZW
released
Annotation file set
: GSE118165 gene expression annotation of LPS-stimulated CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP