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Schema
Citing CMDGA
Clear Filters
Annotation type
7
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
Annotation Category
2
Target gene links
Annotation type Category
3
ATAC-seq
2
DNase-seq
2
H3K27ac ChIP-Seq
1
pCHi-C
1
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
cell line
2
primary cell
Biosample term
21
stomach
19
CD14-positive monocyte
19
heart
16
adrenal gland
16
brain
16
lung
16
muscle of arm
16
small intestine
15
placenta
14
common myeloid progenitor, CD34-positive
14
kidney
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
12
thymus
11
right lung
10
hematopoietic multipotent progenitor cell
10
right kidney
9
B cell
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
liver
8
spinal cord
7
CD8-positive, alpha-beta memory T cell
7
adipose tissue
7
spleen
7
trophoblast cell
6
adipocyte
6
dendritic cell
6
mononuclear cell
6
sigmoid colon
5
body of pancreas
5
gastrocnemius medialis
5
heart left ventricle
5
muscle of trunk
5
ovary
5
psoas muscle
5
thyroid gland
5
transverse colon
4
T cell
4
chorionic villus
4
endocrine pancreas
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
natural killer cell
4
neural progenitor cell
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
breast epithelium
3
caudate nucleus
3
chorion membrane
3
coronary artery
3
endothelial cell of umbilical vein
3
epithelial cell of prostate
3
fibroblast of cardiac tissue
3
heart right ventricle
3
hepatocyte
3
keratinocyte
3
layer of hippocampus
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
naive T cell
3
neurosphere
3
pancreas
3
regulatory T cell
3
retina
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
testis
3
tibial nerve
3
upper lobe of left lung
2
Brodmann (1909) area 46
2
CD4-positive helper T cell
2
CD8-positive, alpha-beta T cell
2
T-cell
2
angular gyrus
2
aorta
2
ascending aorta
2
astrocyte
2
bipolar neuron
2
bronchial epithelial cell
2
cardiac muscle cell
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
frontal cortex
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mesendoderm
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
omental fat pad
2
osteoblast
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skin fibroblast
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
urinary bladder
2
uterus
2
vagina
1
Ammon's horn
1
B cell, CD19-positive
1
CD1c-positive myeloid dendritic cell
1
CD56-positive, CD161-positive immature natural killer cell
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
arm bone
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
beige adipocyte
1
brain microvascular endothelial cell
1
cardiac mesoderm primordium
1
cardiac ventricle
1
cerebellar cortex
1
choroid plexus epithelial cell
1
ectodermal cell
1
embryonic facial prominence
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
erythroblast
1
femur
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin melanocyte
1
gastroesophageal sphincter
1
germinal center
1
germinal matrix
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
inferior parietal cortex
1
iris pigment epithelial cell
1
islet precursor cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
left cardiac atrium
1
leg bone
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
mammary stem cell
1
medulla oblongata
1
megakaryocyte-erythroid progenitor cell
1
mesodermal cell
1
midbrain
1
middle frontal gyrus
1
mucosa of stomach
1
myotube
1
neural cell
1
neuron
1
neuronal stem cell
1
non-pigmented ciliary epithelial cell
1
occipital lobe
1
olfactory neurosphere cell line
1
pancreatic A cell
1
pancreatic acinar cell
Date released
2
May, 2021
Software used
2
abc
Lab
2
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
biosample_type!
cell line
Showing 2 of 2 results
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Download
FileSet
DSR485QCY
released
Annotation file set
: enhancer-gene predicton of CD8-positive_alpha-beta_T_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR886AVL
released
Annotation file set
: enhancer-gene predicton of CD8-positive_alpha-beta_T_cell-Corces2016 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP