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Citing CMDGA
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Annotation type
1
gene expression
1
target gene predictions
Annotation Category
1
Gene expression levels
1
Target gene links
Annotation type Category
38
ChIP-seq
10
DNase-seq
5
ATAC-seq
3
snATAC-seq
2
H3K27ac ChIP-Seq
2
RNA-seq
1
pCHi-C
1
scRNA-seq
Available data
1
bed bed3+
1
tsv
1
txt
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
6
endothelial cell
6
pancreatic acinar cell
6
pancreatic beta cell
6
pancreatic delta cell
6
pancreatic ductal cell
5
pancreatic alpha cell
5
pancreatic stellate cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
3
cardiomyocytes (cardiac muscle cell)
3
hepatocyte
3
kidney interstitial cell
3
macrophage
3
nephron progenitor
3
pancreatic quiescent stellate cell
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
Kupffer cell
2
S-shaped body
2
alternatively activated macrophage
2
aorta
2
gamma-delta T cell
2
heart right ventricle
2
inflammatory macrophage
2
natural killer cell
2
pancreatic polypeptide-secreting cell
2
renal vesicle
2
right cardiac atrium
2
thymus
1
Ammon's horn
1
B cell
1
B-1 B cell
1
B-2 B cell
1
B-lymphoblastoid cell line
1
HepG2
1
Schwann cell
1
T-helper 17 cell
1
activated CD4-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
adipose tissue
1
adrenal gland
1
alpha-beta T cell
1
aortic valve
1
bladder (urinary bladder)
1
cholangiocyte
1
cytotoxic T cell
1
dendritic cell
1
dorsolateral prefrontal cortex
1
effector CD8-positive, alpha-beta T cell
1
embryonic stem cell
1
epithelial cell of distal tubule
1
epithelial cell of proximal tubule
1
erythroblast
1
erythroid lineage cell
1
esophagus
1
fibroblast cell line
1
gastric (mucosa of stomach)
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart
1
heart left ventricle
1
hepatic stellate cell
1
islet of Langerhans
1
kidney connecting tubule epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
left cardiac atrium
1
leukocyte
1
liver
1
lung
1
lymphocyte of B lineage (iPSC)
1
mast cell
1
mature B cell
1
megakaryocyte
1
mesangial cell
1
mesenchymal cell
1
mesenchymal stem cell
1
mesendoderm
1
meso-epithelial cell
1
mitral valve
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
neural progenitor cell
1
neutrophil
1
ovary
1
pancreas
1
pancreatic cell
1
pancreatic epsilon cell
1
plasma cell
1
proximal tubule
1
psoas muscle
1
pulmonary valve
1
quiescent pancreatic stellate cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal principal cell
1
sigmoid colon
1
small intestine
1
spleen
1
tricuspid valve
1
trophoblast
1
ureteric bud
1
white adipose cell
Life stage
1
adult
Date released
1
August, 2021
1
May, 2020
Software used
1
chicago
1
r
1
seurat
Lab
1
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
2
AMP
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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Download
FileSet
DSR512ARP
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for CD8-positive, alpha-beta T cell
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR603PAJ
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP