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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
primary cell
1
in vitro differentiated cells
Biosample term
64
stomach
62
heart
51
muscle of arm
49
lung
48
brain
47
kidney
46
small intestine
45
adrenal gland
43
muscle of leg
42
large intestine
42
placenta
41
A549
41
muscle of back
39
left lung
34
right lung
33
thymus
32
right kidney
31
renal cortex interstitium
31
renal pelvis
30
hematopoietic multipotent progenitor cell
27
left kidney
24
spinal cord
23
spleen
22
liver
19
heart left ventricle
17
sigmoid colon
16
MCF-7
15
K562
14
adipose tissue
14
body of pancreas
14
gastrocnemius medialis
14
ovary
14
thyroid gland
14
transverse colon
13
muscle of trunk
13
pancreas
13
psoas muscle
12
chorionic villus
12
retina
12
tibial nerve
11
Peyer's patch
11
adipocyte
11
caudate nucleus
11
endocrine pancreas
11
heart right ventricle
11
testis
11
upper lobe of left lung
10
left renal cortex interstitium
10
left renal pelvis
10
pituitary stalk
10
right renal pelvis
9
H9
9
HeLa-S3
9
breast epithelium
9
esophagus squamous epithelium
9
layer of hippocampus
9
neural progenitor cell
9
right renal cortex interstitium
9
skeletal muscle tissue
8
ascending aorta
8
coronary artery
8
esophagus muscularis mucosa
8
lower leg skin
8
omental fat pad
8
right atrium auricular region
8
tibial artery
7
SK-N-DZ
7
SK-N-SH
7
chorion membrane
7
eye
7
frontal cortex
7
mesenchymal stem cell
7
parathyroid adenoma
7
prostate gland
7
substantia nigra
7
temporal lobe
7
tongue
7
trophoblast
6
22Rv1
6
WI38
6
angular gyrus
6
aorta
6
cerebellum
6
cingulate gyrus
6
colonic mucosa
6
dendritic cell
6
duodenal mucosa
6
endodermal cell
6
endometrium adenocarcinoma
6
esophagus
6
gastroesophageal sphincter
6
globus pallidus
6
immortal human breast epithelial cell line cell
6
limb
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
putamen
6
stomach smooth muscle
6
thoracic aorta
6
urinary bladder
6
uterus
6
vagina
5
Ammon's horn
5
GM12878
5
HAP-1
5
HEK293
5
HT-29
5
HepG2
5
IMR-90
5
LNCaP clone FGC
5
MM.1S
5
NAMALWA cell
5
OCI-LY7
5
PC-9
5
T47D
5
bipolar neuron
5
cardiac muscle cell
5
left cardiac atrium
5
medulla oblongata
5
mesendoderm
5
mesodermal cell
5
midbrain
5
middle frontal gyrus
5
occipital lobe
5
pons
5
subcutaneous abdominal adipose tissue
5
superior temporal gyrus
4
A172
4
A673
4
ACHN
4
Brodmann (1909) area 46
4
CMK
4
Caki2
4
Daoy
4
GM04503
4
GM04504
4
GM06990
4
GM10248
4
GM10266
4
GM12864
4
GM12865
4
GM23248
4
H1-hESC
4
H4
4
H7-hESC
4
HL-60
4
HUES6
4
KARPAS-422 cell
4
KBM-7
4
L1-S8
4
LHCN-M2
4
LNCAP
4
LoVo cell
4
M059J
4
MG63
4
PC-3
4
Panc1
4
RCC 7860
4
RPMI7951
4
RPMI8226
4
RWPE1
4
SJCRH30
4
SJSA1
4
SK-N-MC
4
SW480
4
WERI-Rb-1
4
cerebellar cortex
4
iPS DF 19.11
4
muscle cell
4
neural cell
4
neuronal stem cell
4
trophoblast cell
4
umbilical cord
3
ACC112
3
AG04449 cell
3
AG04450 cell
3
AG08396 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
C4-2B
3
Caco-2 cell
3
DND-41
3
DOHH2
3
EH
3
EL
3
ELF-1
3
ELR
3
G401
3
GM03348
3
GM08714
3
GM12875
3
GM18507
3
GM19240
3
GM23338
3
H54
3
HCT116
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
epithelial cell of proximal tubule
biosample_type!
primary cell
Showing 1 of 1 results
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Download
FileSet
DSR589PDF
released
Annotation file set
: Accessible chromatin annotation for Blood CD8+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP