Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
1
candidate regulatory elements
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
1
bed bed9+
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
3
cell line
1
primary cell
Biosample term
6
NAMALWA cell
6
SK-N-DZ
6
SK-N-SH
4
glomerular visceral epithelial cell
4
heart
4
psoas muscle
3
A673
3
BE(2)-C
3
CD14-positive, CD16-negative classical monocyte
3
CMK
3
DND-41
3
Daoy
3
G401
3
GM03348
3
GM08714
3
HepG2
3
MG63
3
SJCRH30
3
SK-N-MC
3
WERI-Rb-1
3
heart left ventricle
3
heart right ventricle
3
lung
3
lymphocyte
3
medulloblastoma
3
sigmoid colon
3
small intestine
3
spleen
3
stomach
3
thymus
3
urothelium cell line
2
alternatively activated macrophage
2
erythroblast
2
mature neutrophil
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
cardiac atrium fibroblast
1
pancreatic ductal cell
Disease term
3
retinoblastoma
Organ
3
eye
Life stage
19
adult
18
newborn
4
child
1
unknown
1
young adult
Date released
3
September, 2022
1
May, 2022
Software used
2
chromhmm
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR280FPC
released
Annotation file set
: Candidate regulatory elements for BSS01890 WERI-Rb-1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR979SDJ
released
Annotation file set
: Target gene predictions for BSS01890 WERI-Rb-1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR709UAF
released
Annotation file set
: Chromatin states for BSS01890 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271DAI
released
Annotation file set
: Chromatin state of CD8-positive, alpha-beta T cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP