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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
chromatin state
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ChIP-seq
Available data
2
bed bed3+
1
bed bed9+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
7
mature neutrophil
5
CD14-positive, CD16-negative classical monocyte
4
alternatively activated macrophage
3
CD4-positive, alpha-beta T cell
3
inflammatory macrophage
2
endothelial cell
2
erythroblast
2
fibroblast
2
liver
2
smooth muscle cell
1
BL-2 cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
DG-75 cell
1
JVM-2 cell
1
KARPAS-422 cell
1
SUDHL5
1
T cell
1
U-266 cell
1
Z-138
1
leukocyte
1
macrophage
1
mature eosinophil
1
mesenchymal stem cell
1
skeletal muscle satellite cell
1
type I muscle cell
1
type II muscle cell
Organ
2
epithelium
Life stage
1
adult
1
child
1
unknown
Date released
36
May, 2021
18
November, 2021
14
February, 2021
6
February, 2024
5
August, 2021
4
January, 2021
3
May, 2020
3
May, 2022
1
February, 2023
1
June, 2020
1
October, 2022
Software used
2
macs
1
chromhmm
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
RFA
2
AMP
1
AMP2
Showing 3 of 3 results
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Download
FileSet
DSR271DAI
released
Annotation file set
: Chromatin state of CD8-positive, alpha-beta T cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR897TMQ
released
Annotation file set
: Accessible chromatin from snATAC-seq of endothelial cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR426RPD
released
Annotation file set
: Accessible chromatin annotation of Endothelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP