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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
8
pancreatic alpha cell
8
pancreatic beta cell
8
pancreatic delta cell
8
pancreatic ductal cell
8
pancreatic stellate cell
7
pancreatic acinar cell
5
pancreatic endothelial cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
3
pancreatic polypeptide-secreting cell
3
pancreatic quiescent stellate cell
2
endothelial cell
2
islet of Langerhans
1
CD8-positive, alpha-beta T cell
1
Pancreatic islets
1
Schwann cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
conventional dendritic cell
1
macrophage
1
megakaryocyte
1
memory B cell
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
non-classical monocyte
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic immune cell
1
plasmacytoid dendritic cell
1
purified protein and synthetic DNA oligo binding assay
1
regulatory T cell
1
stellate neuron
1
tissue-resident macrophage
1
type B pancreatic cell
Date released
1
January, 2021
Software used
cicero
1
macs
Lab
44
AMP-T2D consortium
2
Bing Ren, UCSD
2
Jesse Engreitz, Stanford University
1
Katalin Susztak, Upenn
1
Kyle Gaulton, UCSD
Project
1
T1D
RFA
1
T1D
software_used.software.name!
cicero
Showing 1 of 1 results
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Download
FileSet
DSR805RPA
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of pancreatic_CD8_T
Lab:
Kyle Gaulton, UCSD
Project:
T1D