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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
9
accessible chromatin
8
gene expression
3
differential activity
2
binding sites
2
candidate regulatory elements
2
histone modifications
2
target gene predictions
1
chromatin state
1
variant allelic effects
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
1
ATAC-seq
H3K27ac ChIP-Seq
1
HiC
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
55
HeLa-S3
40
H1-hESC
24
K562
21
heart
20
A549
19
HFFc6
19
stomach
17
brain
17
lung
16
muscle of arm
16
small intestine
15
adrenal gland
15
kidney
15
placenta
14
thymus
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
11
hematopoietic multipotent progenitor cell
11
right lung
10
liver
10
pericyte cell
10
right kidney
9
B cell
9
CD4-positive, alpha-beta memory T cell
9
GM12878
9
breast cancer cell
9
endothelial cell
9
left kidney
9
neural progenitor cell
9
renal cortex interstitium
9
renal pelvis
9
spinal cord
8
MCF-7
8
adipose tissue
8
keratinocyte
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
H9
7
fibroblast cell line
7
heart left ventricle
7
lymphocyte
7
melanoma
7
mononuclear cell
7
psoas muscle
7
smooth muscle cell
6
endothelial cell of hepatic sinusoid
6
fibroblast
6
foreskin fibroblast
6
mammary gland epithelial cell
6
olfactory receptor cell
6
sigmoid colon
5
HUES8
5
HepG2
5
endothelial cell of umbilical vein
5
fibroblast of cardiac tissue
5
fibroblast of lung
5
foreskin keratinocyte
5
heart right ventricle
5
iPSC derived cell line
5
ovary
5
pancreas
5
prostate cancer cell line
5
regulatory T cell
5
trophoblast cell
4
CD14-positive monocyte
4
CyT49
4
GM19238
4
GM19239
4
GM19240
4
T cell
4
aorta
4
body of pancreas
4
bronchial epithelial cell
4
cardiac muscle cell
4
chorionic villus
4
colon epithelial cell
4
embryonic stem cell
4
endocrine pancreas
4
fibroblast of dermis
4
gastrocnemius medialis
4
glioblastoma multiforme cancer stem cell
4
hepatocyte
4
layer of hippocampus
4
macrophage
4
mammary epithelial cell
4
mesenchymal stem cell
4
muscle of trunk
4
natural killer cell
4
neuroblastoma cell
4
osteoblast
4
pancreatic delta cell
4
pancreatic ductal cell
4
prostate gland
4
retina
4
skeletal muscle myoblast
4
skin fibroblast
4
testis
4
thyroid gland
4
transverse colon
4
trophoblast
4
upper lobe of left lung
3
22Rv1
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
Caco-2 cell
3
GM06990
3
GM08714
3
GM12864
3
GM12865
3
GM12875
3
GM12891
3
GM12892
3
GM18505
3
GM19099
3
GM19193
3
HCT116
3
HEK293
3
HL-60
3
IMR-90
3
NAMALWA cell
3
NT2-D1 cell
3
Peyer's patch
3
SK-N-MC
3
SK-N-SH
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
adipocyte
3
astrocyte
3
cardiomyocytes (cardiac muscle cell)
3
caudate nucleus
3
chorion membrane
3
choroid plexus epithelial cell
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
endodermal cell
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
erythroblast
3
esophagus
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
immortal human breast epithelial cell line cell
3
islet of Langerhans
3
liposarcoma
3
luminal epithelial cell of mammary gland
3
mesendoderm
3
monocyte
3
naive T cell
3
neuronal stem cell
3
neurosphere
3
neutrophil
3
pancreatic alpha cell
3
pancreatic beta cell
3
retinal pigment epithelial cell
3
skeletal muscle tissue
3
synovial sarcoma cell
3
tibial nerve
3
triple-negative breast cancer
2
Ammon's horn
2
B-lymphoblastoid cell line
2
Brodmann (1909) area 46
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO-320 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
EndoC_BH1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12872
2
GM12873
2
GM12874
2
GM15510
2
GM18507
2
GM18526
2
GM18951
2
GM23248
Organ
2
lymph node
1
epithelium
1
pancreas
Life stage
1
adult
Date released
2
February, 2021
1
March, 2020
1
September, 2022
Software used
2
macs
1
hiccups
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type_category!
H3K27ac ChIP-Seq
Showing 4 of 4 results
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Download
FileSet
DSR127KNA
released
Annotation file set
: Target gene predictions for BSS01274 MM.1S from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR170VOW
released
Annotation file set
: Binding sites annotation for Pancreas EndoC-BH1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR861GVO
released
Annotation file set
: Binding sites annotation for Blood MMPERIOD1S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR373FUA
released
Annotation file set
: A target gene prediction annotation in EndoC_BH1 of DSR433ZII Hi-C
Lab:
AMP-T2D consortium
Project:
AMP