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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
9
accessible chromatin
8
gene expression
3
differential activity
2
binding sites
2
candidate regulatory elements
2
histone modifications
2
target gene predictions
1
chromatin state
1
variant allelic effects
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
HiC
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
21
A549
21
stomach
20
heart
19
CD14-positive monocyte
17
adrenal gland
17
brain
17
lung
17
small intestine
16
muscle of arm
16
placenta
15
kidney
15
thymus
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
11
hematopoietic multipotent progenitor cell
11
right lung
10
B cell
10
liver
10
pericyte cell
10
pituitary stalk
10
right kidney
10
spinal cord
9
CD4-positive, alpha-beta memory T cell
9
K562
9
MCF-7
9
adipose tissue
9
breast cancer cell
9
endothelial cell
9
keratinocyte
9
left kidney
9
neural progenitor cell
9
renal cortex interstitium
9
renal pelvis
9
spleen
7
CD8-positive, alpha-beta memory T cell
7
adipocyte
7
fibroblast cell line
7
foreskin fibroblast
7
melanoma
7
mononuclear cell
7
sigmoid colon
7
smooth muscle cell
7
trophoblast cell
6
HepG2
6
dendritic cell
6
endothelial cell of hepatic sinusoid
6
fibroblast
6
fibroblast of lung
6
heart left ventricle
6
mammary gland epithelial cell
6
ovary
6
psoas muscle
5
CD8-positive, alpha-beta T cell
5
HeLa-S3
5
body of pancreas
5
cardiac muscle cell
5
endothelial cell of umbilical vein
5
fibroblast of cardiac tissue
5
fibroblast of dermis
5
foreskin keratinocyte
5
gastrocnemius medialis
5
hepatocyte
5
macrophage
5
mammary epithelial cell
5
mesenchymal stem cell
5
muscle of trunk
5
natural killer cell
5
osteoblast
5
pancreas
5
pancreatic ductal cell
5
prostate cancer cell line
5
regulatory T cell
5
skeletal muscle myoblast
5
thyroid gland
5
transverse colon
4
GM12878
4
H1-hESC
4
IMR-90
4
Jurkat
4
SK-N-SH
4
T cell
4
astrocyte
4
bronchial epithelial cell
4
chorionic villus
4
colon epithelial cell
4
embryonic stem cell
4
endocrine pancreas
4
epithelial cell of prostate
4
erythroblast
4
glioblastoma multiforme cancer stem cell
4
heart right ventricle
4
layer of hippocampus
4
mesendoderm
4
monocyte
4
neuroblastoma cell
4
neuronal stem cell
4
pancreatic delta cell
4
prostate gland
4
retina
4
skin fibroblast
4
trophoblast
4
upper lobe of left lung
3
22Rv1
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
BJAB cell
3
CD4-positive, alpha-beta T cell
3
Caco-2 cell
3
GM06990
3
GM08714
3
GM12864
3
GM12865
3
GM12875
3
GM12891
3
GM12892
3
GM19238
3
GM19239
3
GM19240
3
HAP-1
3
HCT-116 cell
3
HEK293
3
HL-60
3
HT-29
3
KARPAS-422 cell
3
LoVo cell
3
MCF 10A cell
3
MM.1S
3
NAMALWA cell
3
NT2-D1 cell
3
OCI-LY7
3
PC-9
3
Peyer's patch
3
SK-N-MC
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
THP-1
3
Tumor-derived cell line
3
U937
3
WERI-Rb-1
3
acute myeloid leukemia
3
aorta
3
breast epithelium
3
caudate nucleus
3
chorion membrane
3
choroid plexus epithelial cell
3
coronary artery
3
dermal fibroblast
3
dermis lymphatic vessel endothelial cell
3
diffuse intrinsic pontine glioma
3
endodermal cell
3
endometrium adenocarcinoma
3
esophagus
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
immortal human breast epithelial cell line cell
3
islet of Langerhans
3
liposarcoma
3
luminal epithelial cell of mammary gland
3
myotube
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
retinal pigment epithelial cell
3
skeletal muscle tissue
3
synovial sarcoma cell
3
testis
3
tibial nerve
3
triple-negative breast cancer
2
A673
2
Ammon's horn
2
B-lymphoblastoid cell line
2
Brodmann (1909) area 46
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
COLO-320 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM10248
2
GM10266
2
GM10847
Organ
3
lymph node
Life stage
1
adult
Date released
2
February, 2021
1
May, 2021
1
September, 2022
Software used
2
macs
1
abc
1
r
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
annotation_type_category!
HiC
Showing 4 of 4 results
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Download
FileSet
DSR127KNA
released
Annotation file set
: Target gene predictions for BSS01274 MM.1S from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR170VOW
released
Annotation file set
: Binding sites annotation for Pancreas EndoC-BH1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR861GVO
released
Annotation file set
: Binding sites annotation for Blood MMPERIOD1S from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR064TPU
released
Annotation file set
: enhancer-gene predicton of MM.1S-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP