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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
17
brain
10
pituitary stalk
4
SK-N-SH
4
layer of hippocampus
3
BE(2)-C
3
SK-N-MC
3
caudate nucleus
3
choroid plexus epithelial cell
2
Ammon's horn
2
Brodmann (1909) area 46
2
Daoy
2
SK-N-DZ
2
U-87 MG
2
angular gyrus
2
cerebellum
2
cingulate gyrus
2
frontal cortex
2
medulloblastoma
2
midbrain
2
substantia nigra
2
temporal lobe
1
A172
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
H54
1
M059J
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cerebellar cortex
1
dorsolateral prefrontal cortex
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
middle frontal gyrus
1
pons
1
prefrontal cortex
1
putamen
1
undifferentiated ESC (H9 cell line)
Organ
3
brain
1
epithelium
1
pancreas
Life stage
1
child
Date released
1
February, 2021
1
October, 2022
1
September, 2022
Software used
1
chromhmm
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR797FCT
released
Annotation file set
: Binding sites annotation for SK-N-MC (SK-N-MC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR477UJH
released
Annotation file set
: Target gene predictions for BSS01559 SK-N-MC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR664NZS
released
Annotation file set
: Binding sites annotation for Neural SK-N-MC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP