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Schema
Citing CMDGA
Clear Filters
Annotation type
9
accessible chromatin
8
gene expression
3
differential activity
1
binding sites
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
7
fibroblast
6
endothelial cell of hepatic sinusoid
3
cardiac muscle cell
3
enterocyte
3
macrophage
3
myofibroblast cell
2
cardiac fibroblast
2
muscle of leg
2
HepG2
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Schwann cell
2
T cell
2
basal cell
2
choroid plexus epithelial cell
2
coronary artery
2
endothelial cell
2
endothelial cell of umbilical vein
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
erythroblast
2
fibroblast of lung
2
foreskin fibroblast
2
goblet cell
2
heart
2
heart left ventricle
2
hepatocyte
2
islet of Langerhans
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
smooth muscle cell
2
tibial artery
2
tibial nerve
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
Adipose SGBS cell line (adipocyte)
1
BE(2)-C
1
BJ cell
1
Caco-2 cell
1
DND-41 cell
1
ECC-1
1
EndoC_BH1
1
GM06990
1
GM08714
1
GM10847
1
GM12801
1
GM12864
1
GM12865
1
GM12872
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM15510
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
H1-hESC
1
HAC cell
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HEK293-T-REx cell
1
HFF-Myc
1
HGPS cell
1
HL-60
1
HeLa-S3
1
Heart fetal (cardiac muscle cell)
1
IMR-90
1
K562
1
Liver fetal (hepatocyte)
1
MCF-7
1
MCF10A-Er-Src cell
1
NB4
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
PANC-1 cell
1
PFSK-1 cell
1
Preadipose SGBS cell line (adipocyte)
1
Raji cell
1
SAEC
1
SH-SY5Y cell
1
SK-N-MC
1
SK-N-SH
1
SK-N-SH_RA
1
Satellite Cells, Skeletal Muscle
1
T-47D cell
1
U-87 MG
1
U2OS
1
WERI-Rb-1
1
WI-38 cell
1
adipocyte
1
adipose tissue
1
aortic adventitial fibroblast
1
ascending aorta
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
body of pancreas
1
brain
1
brain pericyte
1
bronchial goblet cell
1
cardiac fibroblast
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
caudate nucleus
1
cerebellum (Hemisphere)
1
cortical cell of adrenal gland
1
esophageal epithelial cell
1
fibroblast of dermis
1
fibroblast of mammary gland
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
frontal cortex
1
glioblastoma cell
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulosa cell
1
heart right ventricle
1
hepatic stellate cell
1
keratinocyte
1
kidney
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mast cell
1
medulla oblongata
1
mesothelial cell
1
midbrain
1
middle frontal gyrus
1
muscle of arm
1
myotube
1
naive t cell
1
occipital lobe
1
osteoblast
1
pancreas
1
pancreatic acinar cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
pons
1
purified protein and synthetic DNA oligo binding assay
1
putamen
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal epithelial cell
1
renal pelvis
1
retina
1
retinal pigment epithelial cell
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
spinal cord
1
subcutaneous adipose tissue
1
superior temporal gyrus
1
thoracic aorta
1
thyroid follicular cell
1
type II pneumocyte
Organ
1
epithelium
1
pancreas
Date released
February, 2021
1
May, 2020
1
October, 2022
Software used
1
chromhmm
1
deltasvm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
February, 2021
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR299KAI
released
Annotation file set
: Binding sites annotation for PANC-1 cell (PANC-1) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR871UFR
released
Annotation file set
: Genetic variants with deltaSVM predictions in EndoB-CH1 beta cell ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP