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Citing CMDGA
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Annotation type
8
accessible chromatin
8
gene expression
3
differential activity
1
binding sites
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
3
Gene expression levels
1
Genetic variant effects
Annotation type Category
3
RNA-seq
1
ATAC-seq
Available data
1
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
1
tissue
Biosample term
7
induced pluripotent stem cell
4
EndoC_BH1
2
MIN6
1
glomerular visceral epithelial cell
Organ
4
epithelium
4
pancreas
Date released
2
March, 2023
1
February, 2023
1
May, 2020
Software used
1
deltasvm
Lab
2
AMP-T2D consortium
2
Anna Gloyn, Oxford
Project
2
AMP
2
community
RFA
2
AMP
2
community
Showing 4 of 4 results
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FileSet
DSR309JFA
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siCALCOCO2 mediated knockdown
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273DTH
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siRNA mediated knockdown
Lab:
Anna Gloyn, Oxford
Project:
community
FileSet
DSR163KQO
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following CRISPR/Cas9 knockout
Lab:
Anna Gloyn, Oxford
Project:
community
FileSet
DSR871UFR
released
Annotation file set
: Genetic variants with deltaSVM predictions in EndoB-CH1 beta cell ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP