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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
Annotation Category
Target gene links
2
cis-regulatory elements
Annotation type Category
8
RNA-seq
6
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
43
heart
43
stomach
35
muscle of arm
33
kidney
33
lung
32
brain
30
small intestine
29
adrenal gland
29
muscle of leg
28
large intestine
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
placenta
26
left lung
23
right lung
22
A549
22
renal cortex interstitium
22
renal pelvis
22
right kidney
21
thymus
20
hematopoietic multipotent progenitor cell
18
left kidney
16
B cell
16
spinal cord
16
spleen
14
CD4-positive, alpha-beta memory T cell
14
heart left ventricle
14
liver
12
foreskin keratinocyte
11
sigmoid colon
10
MCF-7
10
pancreas
10
trophoblast cell
9
body of pancreas
9
endothelial cell of umbilical vein
9
gastrocnemius medialis
9
ovary
9
retina
9
thyroid gland
9
tibial nerve
9
transverse colon
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
K562
8
Peyer's patch
8
cardiac muscle cell
8
caudate nucleus
8
chorionic villus
8
foreskin fibroblast
8
heart right ventricle
8
left renal cortex interstitium
8
left renal pelvis
8
muscle of trunk
8
psoas muscle
8
right renal pelvis
8
testis
8
upper lobe of left lung
7
H9
7
T-helper 1 cell
7
adipose tissue
7
endocrine pancreas
7
esophagus squamous epithelium
7
mononuclear cell
7
natural killer cell
7
neurosphere
7
regulatory T cell
7
right renal cortex interstitium
7
skeletal muscle myoblast
6
ascending aorta
6
breast epithelium
6
dermis blood vessel endothelial cell
6
esophagus muscularis mucosa
6
fibroblast of lung
6
hepatocyte
6
layer of hippocampus
6
lower leg skin
6
omental fat pad
6
right atrium auricular region
6
skeletal muscle tissue
6
tibial artery
5
cardiac fibroblast
5
HeLa-S3
5
SK-N-DZ
5
T cell
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
adipocyte
5
bronchial epithelial cell
5
choroid plexus epithelial cell
5
coronary artery
5
epithelial cell of prostate
5
eye
5
fibroblast of cardiac tissue
5
foreskin melanocyte
5
frontal cortex
5
gastroesophageal sphincter
5
globus pallidus
5
glomerular endothelial cell
5
glomerular visceral epithelial cell
5
kidney tubule cell
5
mesenchymal stem cell
5
neural progenitor cell
5
osteoblast
5
parathyroid adenoma
5
prostate gland
5
putamen
5
renal cortical epithelial cell
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
5
tongue
5
trophoblast
4
22Rv1
4
Ammon's horn
4
HEK293
4
SK-N-SH
4
T-cell
4
angular gyrus
4
aorta
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
brain pericyte
4
cerebellum
4
chorion membrane
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
epithelial cell of proximal tubule
4
esophagus
4
fibroblast of breast
4
fibroblast of dermis
4
hepatic stellate cell
4
kidney epithelial cell
4
kidney glomerular epithelial cell
4
left cardiac atrium
4
limb
4
mammary epithelial cell
4
mammary gland epithelial cell
4
medulla oblongata
4
mesodermal cell
4
midbrain
4
middle frontal gyrus
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
occipital lobe
4
peripheral blood mononuclear cell
4
pons
4
retinal pigment epithelial cell
4
skeletal muscle cell
4
skin fibroblast
4
smooth muscle cell of the brain vasculature
4
stomach smooth muscle
4
superior temporal gyrus
4
thoracic aorta
4
urinary bladder
4
uterus
4
vagina
3
A172
3
ACHN
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Caki2
3
Daoy
3
GM04503
3
GM04504
3
GM06990
3
GM10248
3
GM10266
3
GM12864
3
GM12865
3
GM12878
3
GM23248
3
H4
3
HAP-1
3
HL-60
3
HT-29
3
HUES6
3
HepG2
3
IMR-90
3
KBM-7
3
L1-S8
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
M059J
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-3
3
PC-9
Organ
2
embryo
Life stage
1
embryonic
Date released
1
June, 2020
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_category!
Target gene links
Showing 2 of 2 results
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Download
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR165RXW
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP