Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
Annotation Category
2
Target gene links
cis-regulatory elements
Annotation type Category
37
HiC
8
RNA-seq
2
DNase-seq
1
ATAC-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
21
heart
21
stomach
19
A549
19
CD14-positive monocyte
17
brain
17
muscle of arm
16
adrenal gland
16
lung
16
small intestine
15
kidney
15
placenta
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
12
thymus
11
right kidney
11
right lung
10
hematopoietic multipotent progenitor cell
10
pituitary stalk
10
renal cortex interstitium
10
renal pelvis
9
B cell
9
CD4-positive, alpha-beta memory T cell
9
left kidney
8
liver
8
spinal cord
7
CD8-positive, alpha-beta memory T cell
7
K562
7
adipose tissue
7
spleen
7
trophoblast cell
6
MCF-7
6
adipocyte
6
body of pancreas
6
dendritic cell
6
heart left ventricle
6
mononuclear cell
6
sigmoid colon
5
gastrocnemius medialis
5
muscle of trunk
5
ovary
5
psoas muscle
5
thyroid gland
5
transverse colon
4
HeLa-S3
4
T cell
4
caudate nucleus
4
chorionic villus
4
coronary artery
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
heart right ventricle
4
hepatocyte
4
natural killer cell
4
neural progenitor cell
4
pancreas
4
retina
4
skeletal muscle myoblast
4
tibial nerve
3
Peyer's patch
3
SK-N-SH
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
ascending aorta
3
breast epithelium
3
cardiac muscle cell
3
chorion membrane
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
fibroblast of cardiac tissue
3
foreskin fibroblast
3
frontal cortex
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
naive T cell
3
neurosphere
3
regulatory T cell
3
right atrium auricular region
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
testis
3
tibial artery
3
upper lobe of left lung
2
cardiac fibroblast
2
muscle of leg
2
22Rv1
2
A673
2
BJAB cell
2
Brodmann (1909) area 46
2
CD4-positive helper T cell
2
CD8-positive, alpha-beta T cell
2
GM12878
2
H1-hESC
2
H7-hESC
2
H9
2
HAP-1
2
HT-29
2
HepG2
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
2
SK-N-DZ
2
T-cell
2
T47D
2
THP-1
2
U937
2
angular gyrus
2
aorta
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
bipolar neuron
2
bronchial epithelial cell
2
cerebellum
2
choroid plexus epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
epithelial cell of proximal tubule
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hepatic stellate cell
2
iPS DF 19.11
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
left cardiac atrium
2
limb
2
lower leg skin
2
medulla oblongata
2
mesendoderm
2
midbrain
2
middle frontal gyrus
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
occipital lobe
2
omental fat pad
2
osteoblast
2
parathyroid adenoma
2
pons
2
prostate gland
2
putamen
2
renal cortical epithelial cell
2
skeletal muscle cell
2
skin fibroblast
2
smooth muscle cell of the brain vasculature
2
stomach smooth muscle
2
substantia nigra
2
superior temporal gyrus
2
temporal lobe
2
thoracic aorta
2
tongue
2
trophoblast
2
urinary bladder
2
uterus
2
vagina
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG04449 cell
Organ
2
embryo
Life stage
1
embryonic
Date released
1
May, 2021
1
September, 2022
Software used
1
abc
1
r
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
annotation_category!
cis-regulatory elements
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR748AAQ
released
Annotation file set
: Target gene predictions for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR922GBW
released
Annotation file set
: enhancer-gene predicton of H1-hESC-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP