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Schema
Citing CMDGA
Clear Filters
Annotation type
39
target gene predictions
8
gene expression
2
binding sites
2
chromatin state
1
accessible chromatin
1
candidate regulatory elements
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
cell line
1
stem cell
Biosample term
6
trophoblast cell
4
chorionic villus
3
H1-hESC
3
trophoblast
2
H4
2
H7-hESC
2
HUES6
2
embryonic facial prominence
2
endodermal cell
1
ELF-1
1
ES-I3
1
H9
1
HUES48
1
HUES64
1
HUES8
1
UCSF-4
1
cardiac mesoderm primordium
1
ectodermal cell
1
hESC H9
1
mesodermal cell
1
placental hematopoietic stem cell
1
primordial germ cell
1
trophoblast giant cell
Organ
3
embryo
Life stage
2
embryonic
Date released
1
August, 2017
1
June, 2020
1
September, 2022
Software used
2
chromhmm
1
macs
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR165RXW
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP