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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
chromatin state
1
candidate regulatory elements
1
histone modifications
Annotation Category
39
Target gene links
8
Gene expression levels
6
cis-regulatory elements
Annotation type Category
6
ChIP-seq
1
DNase-seq
Available data
5
bed bed3+
1
bed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
5
cell line
1
stem cell
Biosample term
103
monocyte
63
heart
60
stomach
57
kidney
52
brain
50
muscle of arm
49
lung
44
small intestine
43
muscle of leg
43
placenta
42
A549
42
CD8-positive, alpha-beta T cell
42
adrenal gland
41
large intestine
41
muscle of back
40
common myeloid progenitor, CD34-positive
39
left lung
39
neural progenitor cell
33
retina
33
right lung
33
thymus
31
hematopoietic multipotent progenitor cell
31
right kidney
30
B cell
30
renal cortex interstitium
29
renal pelvis
28
liver
27
left kidney
24
spinal cord
23
CD4-positive, alpha-beta memory T cell
23
heart left ventricle
22
spleen
20
breast cancer cell
20
fibroblast
20
pigmented layer of retina
19
MCF-7
18
endothelial cell
17
K562
17
foreskin keratinocyte
17
hepatocyte
16
adipose tissue
16
embryonic stem cell
15
CD8-positive, alpha-beta memory T cell
15
adipocyte
15
keratinocyte
15
sigmoid colon
14
T cell
14
foreskin fibroblast
14
retinal pigment epithelial cell
14
trophoblast cell
13
HepG2
13
cardiac muscle cell
13
endothelial cell of umbilical vein
13
macrophage
13
mononuclear cell
12
CD14-positive monocyte
12
CD4-positive, alpha-beta T cell
12
excitatory neuron
12
natural killer cell
12
neuroblastoma cell
12
pericyte cell
12
regulatory T cell
12
upper lobe of left lung
11
endothelial cell of hepatic sinusoid
11
fibroblast of lung
11
gastrocnemius medialis
11
heart right ventricle
11
pancreas
11
skeletal muscle myoblast
11
smooth muscle cell
11
testis
11
thyroid gland
11
tibial nerve
10
EndoC_BH1
10
astrocyte
10
bronchial epithelial cell
10
caudate nucleus
10
chorionic villus
10
fibroblast of cardiac tissue
10
gastric cancer cell
10
islet of Langerhans
10
layer of hippocampus
10
mammary epithelial cell
10
mesenchymal stem cell
10
muscle of trunk
10
osteoblast
10
ovary
10
psoas muscle
10
skeletal muscle tissue
10
temporal lobe
9
HeLa-S3
9
Peyer's patch
9
Rhabdomyosarcoma
9
T-helper 17 cell
9
body of pancreas
9
coronary artery
9
diffuse intrinsic pontine glioma
9
endocrine pancreas
9
liposarcoma
9
mammary gland epithelial cell
9
neurosphere
9
pancreatic ductal cell
9
substantia nigra
9
transverse colon
8
22Rv1
8
H9
8
T-helper 1 cell
8
T-helper 2 cell
8
fibroblast of dermis
8
left cardiac atrium
8
left renal cortex interstitium
8
neuronal stem cell
8
pancreatic beta cell
8
prostate gland
8
skeletal muscle satellite cell
7
B-lymphoblastoid cell line
7
GM12878
7
HEK293
7
aorta
7
colonic mucosa
7
erythroblast
7
esophageal adenocarcinoma
7
esophagus squamous epithelium
7
fibroblast cell line
7
left renal pelvis
7
mature neutrophil
7
omental fat pad
7
pancreatic acinar cell
7
right renal pelvis
7
tibial artery
6
Chondroid Chordoma
6
GM06990
6
GM12864
6
GM12865
6
GM12875
6
H1-hESC
6
HL-60
6
IMR-90
6
SK-N-DZ
6
angular gyrus
6
ascending aorta
6
cerebellum
6
chondrocyte
6
choroid plexus epithelial cell
6
cingulate gyrus
6
dermis blood vessel endothelial cell
6
duodenal mucosa
6
endodermal cell
6
epithelial cell of prostate
6
foreskin melanocyte
6
hESC cell
6
hepatic stellate cell
6
kidney tubule cell
6
lower leg skin
6
mesodermal cell
6
neuroblastoma cell line
6
neutrophil
6
right renal cortex interstitium
6
thoracic aorta
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
BE(2)-C
5
BJ cell
5
CD14-positive, CD16-negative classical monocyte
5
CD1c-positive myeloid dendritic cell
5
CMK
5
Caco-2 cell
5
Ewing sarcoma
5
GM08714
5
GM12891
5
GM12892
5
GM19238
5
GM19239
5
GM19240
5
GM23248
5
HAP-1
5
HT-29
5
KARPAS-422 cell
5
LHCN-M2
5
LNCaP clone FGC
5
MG63
5
MM.1S
5
NAMALWA cell
5
OCI-LY1
5
PC-3
5
SK-N-MC
5
SW480
5
T47D
5
breast epithelium
5
dermis lymphatic vessel endothelial cell
5
esophagus
5
esophagus muscularis mucosa
5
fibroblast of breast
5
immortal human breast epithelial cell line cell
5
midbrain
5
muscle layer of duodenum
5
myoepithelial cell of mammary gland
Organ
6
embryo
Life stage
3
embryonic
Date released
2
February, 2021
2
September, 2022
1
August, 2017
June, 2020
1
October, 2022
Software used
3
chromhmm
2
macs
1
r
Lab
5
AMP-T2D consortium
1
Stephen Parker, UMich
Project
6
AMP
RFA
6
AMP
month_released!
June, 2020
Showing 6 of 6 results
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Download
FileSet
DSR876GWY
released
Annotation file set
: Binding sites annotation for H1-hESC (H1-hESC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR416QNM
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR188ZAX
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP