Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
cell line
1
stem cell
Biosample term
128
monocyte
88
heart
83
stomach
80
kidney
72
brain
68
lung
67
muscle of arm
62
small intestine
61
adrenal gland
59
placenta
57
muscle of leg
55
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
50
CD8-positive, alpha-beta T cell
48
liver
47
neural progenitor cell
47
thymus
44
islet of Langerhans
44
right lung
42
B cell
42
hematopoietic multipotent progenitor cell
42
right kidney
41
endothelial cell
40
renal cortex interstitium
39
renal pelvis
39
retina
36
hepatocyte
36
left kidney
34
heart left ventricle
33
spleen
32
CD4-positive, alpha-beta memory T cell
32
adipose tissue
31
CD14-positive monocyte
31
fibroblast
30
spinal cord
27
macrophage
26
adipocyte
26
regulatory T cell
25
smooth muscle cell
24
body of pancreas
24
tibial nerve
23
epithelial cell of proximal tubule
23
pancreatic ductal cell
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
T-helper 1 cell
22
natural killer cell
22
pericyte cell
22
sigmoid colon
22
trophoblast cell
21
T-helper 17 cell
21
caudate nucleus
21
coronary artery
21
foreskin keratinocyte
21
subcutaneous adipose tissue
20
glomerular endothelial cell
20
mononuclear cell
20
pancreas
20
pigmented layer of retina
19
endothelial cell of umbilical vein
19
heart right ventricle
19
ovary
19
psoas muscle
18
mesenchymal stem cell
18
pancreatic beta cell
18
right atrium auricular region
18
substantia nigra
17
T-helper 2 cell
17
astrocyte
17
keratinocyte
17
muscle of trunk
17
omental fat pad
17
pancreatic alpha cell
17
thyroid gland
17
tibial artery
17
transverse colon
16
ascending aorta
16
cerebellum
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
fibroblast of lung
16
gastrocnemius medialis
16
layer of hippocampus
16
skeletal muscle tissue
16
testis
15
CD4-positive, alpha-beta T cell
15
embryonic stem cell
15
endocrine pancreas
15
foreskin fibroblast
15
frontal cortex
15
neutrophil
15
osteoblast
15
pancreatic acinar cell
15
pancreatic delta cell
15
retinal pigment epithelial cell
15
skeletal muscle myoblast
15
upper lobe of left lung
14
cardiac muscle cell
14
excitatory neuron
14
mammary gland epithelial cell
13
Peyer's patch
13
aorta
13
neurosphere
13
prostate gland
13
putamen
13
skeletal muscle satellite cell
13
temporal lobe
12
fibroblast of cardiac tissue
12
fibroblast of dermis
12
left renal cortex interstitium
12
naive thymus-derived CD4-positive, alpha-beta T cell
11
Ammon's horn
11
bronchial epithelial cell
11
cardiomyocytes
11
erythroblast
11
left cardiac atrium
11
left renal pelvis
11
mammary epithelial cell
11
right renal pelvis
10
angular gyrus
10
breast epithelium
10
colonic mucosa
10
dermis blood vessel endothelial cell
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
glomerular visceral epithelial cell
10
pancreatic stellate cell
10
right renal cortex interstitium
10
thoracic aorta
9
chorion membrane
9
cingulate gyrus
9
duodenal mucosa
9
esophagus
9
kidney tubule cell
9
neuronal stem cell
9
parathyroid adenoma
9
trophoblast
9
vagina
8
T-cell acute lymphoblastic leukemia
8
cardiomyocytes (cardiac muscle cell)
8
endodermal cell
8
epithelial cell of prostate
8
extended pluripotent stem (EPS) cells
8
eye
8
fibroblast of breast
8
foreskin melanocyte
8
hepatic stellate cell
8
induced pluripotent stem cell
8
lower leg skin
8
myoepithelial cell of mammary gland
8
naive T cell
progenitor cell of endocrine pancreas
8
skeletal muscle fiber
8
tongue
7
amygdala
7
choroid plexus epithelial cell
7
dendritic cell
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
hypothalamus
7
limb
7
mature neutrophil
7
memory B cell
7
mesendoderm
7
right lobe of liver
7
stomach smooth muscle
6
Brodmann (1909) area 46
6
CD1c-positive myeloid dendritic cell
6
CD4-positive helper T cell
6
T-cell
6
alternatively activated macrophage
6
anterior cingulate cortex
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
fibroblast of villous mesenchyme
6
gamma-delta T cell
6
globus pallidus
6
glutamatergic neuron
6
kidney glomerular epithelial cell
6
middle frontal gyrus
6
mucosa of rectum
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
nucleus accumbens
6
plasma cell
6
renal cortical epithelial cell
6
skin fibroblast
6
type I muscle cell
6
uterus
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
Organ
1
embryo
Life stage
1
embryonic
Date released
1
August, 2017
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
month_released!
June, 2020
biosample_term_name!
progenitor cell of endocrine pancreas
biosample_type!
cell line
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP