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Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
cell line
1
stem cell
Biosample term
25
kidney
22
stomach
21
heart
20
breast cancer cell
17
brain
17
lung
17
muscle of arm
15
epithelial cell of proximal tubule
15
muscle of back
15
placenta
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
large intestine
14
small intestine
13
glomerular endothelial cell
13
left lung
13
muscle of leg
12
neuroblastoma cell
11
cardiomyocytes
11
gastric cancer cell
11
hematopoietic multipotent progenitor cell
11
liver
10
diffuse intrinsic pontine glioma
10
islet of Langerhans
10
mammary epithelial cell
10
renal cortex interstitium
10
right lung
10
thymus
9
Rhabdomyosarcoma
9
adipocyte
9
cardiac muscle cell
9
foreskin keratinocyte
9
keratinocyte
9
liposarcoma
9
renal pelvis
8
CD4-positive, alpha-beta T cell
8
MCF-7
8
T-cell acute lymphoblastic leukemia
8
esophageal adenocarcinoma
8
foreskin fibroblast
8
induced pluripotent stem cell
8
neuronal stem cell
8
right kidney
8
spleen
7
B cell
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta T cell
7
endothelial cell
7
fibroblast cell line
7
hESC cell
7
heart left ventricle
7
left kidney
7
spinal cord
6
Chondroid Chordoma
6
H9
6
acute myeloid leukemia
6
bronchial epithelial cell
6
endothelial cell of umbilical vein
6
hepatocyte
6
kidney interstitial cell
6
neuroblastoma cell line
6
pancreas
5
A549
5
CD4-positive, alpha-beta memory T cell
5
Ewing sarcoma
5
HepG2
5
adipose tissue
5
embryonic stem cell
5
esophageal squamous cell carcinoma
5
foreskin melanocyte
5
glioblastoma multiforme cancer stem cell
5
kidney loop of Henle thin ascending limb epithelial cell
5
natural killer cell
5
neural progenitor cell
5
osteoblast
5
osteosarcoma
5
prostate cancer cell line
5
subcutaneous adipose tissue
5
testis
4
22Rv1
4
CD14-positive monocyte
4
GM12878
4
HEK293
4
HS-SY-2 cell
4
Jurkat
4
K562
4
LNCAP
4
Mantle cell lymphoma
4
Peyer's patch
4
RS4-11 cell
4
Rh-4 cell
4
T-cell
4
Th1 cell
4
Tumor-derived cell line
4
WI38
4
body of pancreas
4
bone tissue
4
caudate nucleus
4
chorionic villus
4
colon adenocarcinoma
4
dermal fibroblast
4
diffuse large B-cell lymphoma
4
erythroid progenitor cell
4
esophagus squamous epithelium
4
fibroblast of lung
4
gastroesophageal sphincter
4
glioblastoma cell
4
glioma cell
4
glomerular visceral epithelial cell
4
immortal neural cell line cell
4
kidney cortex collecting duct principal cell
4
kidney loop of Henle thick ascending limb epithelial cell
4
nephron progenitor
4
right renal pelvis
4
sigmoid colon
4
skeletal muscle myoblast
4
squamous cell lung carcinoma
4
substantia nigra
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
4
upper lobe of left lung
3
B-lymphocyte
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
COLO205
3
GM06990
3
GM12864
3
GM12865
3
GM12873
3
GM12875
3
GM23248
3
H1-hESC
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
Ishikawa
3
LHCN-M2
3
MCF 10A
3
MG63
3
MM.1S
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RKO
3
RPMI8226
3
RWPE1
3
S-shaped body
3
SK-N-DZ
3
SK-N-MC
3
SW480
3
T-helper 1 cell
3
WERI-Rb-1
3
adult endothelial progenitor cell
3
ascending aorta
3
breast epithelium
3
cardiac fibroblast
3
cardiac precursors (cardiac muscle cell)
3
choroid plexus epithelial cell
3
chronic lymphocytic leukemia cell
3
cingulate gyrus
3
colonic mucosa
3
dermis blood vessel endothelial cell
3
dermis microvascular lymphatic vessel endothelial cell
3
endocrine pancreas
3
endodermal cell
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
fibroblast
3
fibroblast of mammary gland
3
gastrocnemius medialis
3
hematopoietic cell
3
hepatic stellate cell
3
kidney cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
layer of hippocampus
3
left renal pelvis
3
leukemic stem cell
3
lower leg skin
3
lymphoblastoid cell line
3
melanoma
3
temporal lobe
3
trophoblast cell
2
143B
2
501A
2
697 cell
2
769-P cell
2
786-O cell
2
A-1847 cell
2
A-375 cell
2
A-498 cell
2
A-673 cell
2
AG04449 cell
Organ
3
embryo
Life stage
1
embryonic
Date released
37
February, 2024
8
August, 2021
3
September, 2022
2
February, 2021
1
August, 2017
1
June, 2020
1
May, 2021
1
October, 2022
Software used
2
macs
1
chromhmm
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR416QNM
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR188ZAX
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP