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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
cell line
1
stem cell
Biosample term
36
heart
33
muscle of arm
29
brain
29
muscle of leg
28
lung
28
muscle of back
27
large intestine
27
stomach
26
kidney
26
left lung
26
placenta
23
small intestine
22
right kidney
22
right lung
20
renal cortex interstitium
19
renal pelvis
18
left kidney
18
thymus
16
adrenal gland
14
spinal cord
9
trophoblast cell
8
chorionic villus
8
left renal cortex interstitium
8
muscle of trunk
7
H9
7
neurosphere
7
right renal cortex interstitium
6
left renal pelvis
6
retina
6
right renal pelvis
5
neural progenitor cell
4
cardiac muscle cell
4
endodermal cell
4
eye
4
heart left ventricle
4
liver
4
mesodermal cell
4
tongue
4
trophoblast
3
HEK293
3
germinal matrix
3
limb
3
neural cell
3
testis
2
ELF-1
2
H1-hESC
2
HUES48
2
HUES6
2
HUES64
2
IMR-90
2
UCSF-4
2
amnion
2
cardiac myoblast
2
cardiovascular progenitor cell
2
chorion
2
chorion membrane
2
ectodermal cell
2
femur
2
heart right ventricle
2
hepatocyte
2
islet precursor cell
2
kidney capillary endothelial cell
2
left cardiac atrium
2
mesenchymal stem cell
2
mesendoderm
2
neuroepithelial stem cell
2
neuron
2
neuronal stem cell
2
ovary
2
placental basal plate
2
skin fibroblast
2
smooth muscle cell
2
spleen
2
umbilical cord
1
AG04449
1
AG04449 cell
1
AG04450
1
AG04450 cell
1
ES-I3
1
H1
1
H7
1
H7-hESC
1
HEK293T
1
HTR-8/Svneo
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
arm bone
1
astrocyte
1
cardiac fibroblast
1
cardiac mesoderm primordium
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
ecto neural progenitor cell
1
embryonic facial prominence
1
fibroblast of cardiac tissue
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
forelimb muscle
1
hindlimb muscle
1
left leg bone
1
leg bone
1
mid-neurogenesis radial glial cells
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
radial glial cell
1
right arm bone
1
skin of body
1
urinary bladder
Organ
2
embryo
Life stage
2
embryonic
Date released
1
August, 2017
1
September, 2022
Software used
2
chromhmm
r
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
2
AMP
software_used.software.name!
r
biosample_term_name!
mammary gland epithelial cell
Showing 2 of 2 results
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Download
FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP