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Schema
Citing CMDGA
Clear Filters
Annotation type
17
target gene predictions
2
binding sites
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
63
heart
62
stomach
55
kidney
50
muscle of arm
49
brain
49
lung
45
small intestine
44
muscle of leg
43
adrenal gland
41
large intestine
41
muscle of back
41
placenta
40
A549
40
common myeloid progenitor, CD34-positive
39
left lung
34
right lung
32
retina
32
thymus
31
right kidney
30
B cell
30
hematopoietic multipotent progenitor cell
30
renal cortex interstitium
30
renal pelvis
27
left kidney
26
liver
23
CD4-positive, alpha-beta memory T cell
23
spinal cord
22
heart left ventricle
22
spleen
20
pigmented layer of retina
19
neural progenitor cell
18
monocyte
16
adipocyte
16
endothelial cell
16
fibroblast
16
foreskin keratinocyte
16
sigmoid colon
15
CD8-positive, alpha-beta memory T cell
15
MCF-7
15
T cell
15
adipose tissue
14
trophoblast cell
13
CD8-positive, alpha-beta T cell
13
endothelial cell of umbilical vein
13
excitatory neuron
13
gastrocnemius medialis
13
hepatocyte
13
macrophage
13
mononuclear cell
13
natural killer cell
13
ovary
13
pancreas
12
CD14-positive monocyte
12
CD4-positive, alpha-beta T cell
12
T-helper 1 cell
12
body of pancreas
12
chorionic villus
12
heart right ventricle
12
muscle of trunk
12
pericyte cell
12
psoas muscle
12
retinal pigment epithelial cell
12
smooth muscle cell
12
thyroid gland
12
tibial nerve
11
Peyer's patch
11
astrocyte
11
caudate nucleus
11
embryonic stem cell
11
endocrine pancreas
11
regulatory T cell
11
transverse colon
10
T-helper 17 cell
10
T-helper 2 cell
10
fibroblast of cardiac tissue
10
fibroblast of lung
10
foreskin fibroblast
10
islet of Langerhans
10
layer of hippocampus
10
mesenchymal stem cell
10
neurosphere
10
testis
10
upper lobe of left lung
9
cardiac muscle cell
9
coronary artery
9
esophagus squamous epithelium
9
left cardiac atrium
9
left renal cortex interstitium
9
left renal pelvis
9
omental fat pad
9
skeletal muscle tissue
9
temporal lobe
8
EndoC_BH1
8
H9
8
HeLa-S3
8
angular gyrus
8
aorta
8
ascending aorta
8
breast epithelium
8
dermis blood vessel endothelial cell
8
esophagus muscularis mucosa
8
keratinocyte
8
lower leg skin
8
mammary gland epithelial cell
8
osteoblast
8
pancreatic beta cell
8
pancreatic ductal cell
8
skeletal muscle myoblast
8
skeletal muscle satellite cell
8
tibial artery
7
SK-N-DZ
7
bronchial epithelial cell
7
chorion membrane
7
cingulate gyrus
7
colonic mucosa
7
duodenal mucosa
7
epithelial cell of prostate
7
erythroblast
7
eye
7
fibroblast of dermis
7
kidney tubule cell
7
mature neutrophil
7
mucosa of rectum
7
pancreatic acinar cell
7
pancreatic alpha cell
7
parathyroid adenoma
7
right atrium auricular region
7
right renal cortex interstitium
7
right renal pelvis
7
substantia nigra
7
tongue
6
22Rv1
6
HepG2
6
SGBS preadipocytes
6
SK-N-SH
6
WI38
6
cerebellum
6
endodermal cell
6
endometrium adenocarcinoma
6
endothelial cell of hepatic sinusoid
6
esophagus
6
fibroblast of breast
6
foreskin melanocyte
6
frontal cortex
6
gastroesophageal sphincter
6
glomerular visceral epithelial cell
6
glutamatergic neuron
6
immortal human breast epithelial cell line cell
6
limb
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
thoracic aorta
5
Ammon's horn
5
CD14-positive, CD16-negative classical monocyte
5
GM12878
5
HEK293
5
LNCaP clone FGC
5
NAMALWA cell
5
T47D
5
chondrocyte
5
choroid plexus epithelial cell
5
colon epithelial cell
5
globus pallidus
5
glomerular endothelial cell
5
hepatic stellate cell
5
inhibitory neuron
5
kidney glomerular epithelial cell
5
mammary epithelial cell
5
mesodermal cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
neural cell
5
neuron
5
pancreatic delta cell
5
prostate gland
5
skin fibroblast
5
stomach smooth muscle
5
urinary bladder
4
A172
4
ACHN
4
Brodmann (1909) area 46
4
CD1c-positive myeloid dendritic cell
4
Caki2
4
Daoy
4
GM04503
4
GM04504
4
GM06990
4
GM10248
4
GM10266
4
GM12864
4
GM12865
4
GM23248
4
H1-hESC
4
H4
4
HAP-1
4
HL-60
4
HT-29
4
HUES6
Disease term
Philadelphia-positive myelogenous leukemia
Organ
3
blood
3
bodily fluid
Life stage
1
adult
Date released
1
August, 2017
1
February, 2021
1
June, 2020
Software used
1
chromhmm
1
encode-ccres
1
macs
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
disease_term_name!
Philadelphia-positive myelogenous leukemia
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR396CCK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE K562
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR191JBF
released
Annotation file set
: Accessible chromatin annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR418295
released
Annotation file set
: ChromHMM 13-state model for for human K562
Lab:
Stephen Parker, UMich
Project:
AMP