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Schema
Citing CMDGA
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Annotation type
7
target gene predictions
Annotation Category
cis-regulatory elements
7
Target gene links
Annotation type Category
7
DNase-seq
6
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
23
hg19
GRCh38
Organism
7
Homo sapiens
Biosample type
7
cell line
Biosample term
29
islet of Langerhans
25
heart
23
kidney
23
monocyte
22
stomach
19
A549
19
CD14-positive monocyte
19
liver
18
adrenal gland
18
brain
18
epithelial cell of proximal tubule
18
lung
17
induced pluripotent stem cell
17
muscle of arm
17
small intestine
16
glomerular endothelial cell
15
adipose tissue
15
endothelial cell
15
placenta
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
14
thymus
13
EndoC_BH1
13
hepatocyte
13
left lung
13
muscle of back
12
B cell
12
neural progenitor cell
12
pancreatic ductal cell
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
regulatory T cell
11
right kidney
11
right lung
11
subcutaneous adipose tissue
10
H1-hESC
10
T-helper 1 cell
10
T-helper 17 cell
10
heart left ventricle
10
pancreatic alpha cell
10
pancreatic beta cell
10
pancreatic delta cell
10
pituitary stalk
10
renal cortex interstitium
10
renal pelvis
9
CD4-positive, alpha-beta memory T cell
9
adipocyte
9
extended pluripotent stem (EPS) cells
9
left kidney
9
pancreatic acinar cell
9
progenitor cell of endocrine pancreas
9
spleen
8
body of pancreas
8
cardiomyocytes (cardiac muscle cell)
8
macrophage
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
neutrophil
8
psoas muscle
8
spinal cord
7
CD8-positive, alpha-beta T cell
7
CD8-positive, alpha-beta memory T cell
7
K562
7
dendritic cell
7
glomerular visceral epithelial cell
7
heart right ventricle
7
kidney loop of Henle thin ascending limb epithelial cell
7
mesenchymal stem cell
7
natural killer cell
7
ovary
7
sigmoid colon
7
smooth muscle cell
7
tibial nerve
7
trophoblast cell
6
MCF-7
6
T cell
6
T-helper 2 cell
6
cardiac precursors (cardiac muscle cell)
6
coronary artery
6
fibroblast
6
kidney interstitial cell
6
mononuclear cell
6
pancreas
6
pancreatic stellate cell
6
right atrium auricular region
6
skeletal muscle tissue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
aorta
5
caudate nucleus
5
endothelial cell of umbilical vein
5
frontal cortex
5
gastrocnemius medialis
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
muscle of trunk
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
omental fat pad
5
retina
5
skeletal muscle myoblast
5
thyroid gland
5
tibial artery
5
transverse colon
4
HeLa-S3
4
adult endothelial progenitor cell
4
ascending aorta
4
bone tissue
4
cardiac muscle cell
4
cartilage tissue
4
cerebellum
4
chorionic villus
4
endocrine pancreas
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
gamma-delta T cell
4
keratinocyte
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mammary gland epithelial cell
4
memory B cell
4
nephron progenitor
4
osteoblast
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic polypeptide-secreting cell
4
skeletal muscle fiber
4
testis
4
vascular associated smooth muscle cell
3
Ammon's horn
3
Cycling Mononuclear Phagocyte
3
HepG2
3
Mast Cell
3
Peyer's patch
3
S-shaped body
3
SK-N-SH
3
Schwann cell
3
astrocyte
3
breast epithelium
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
Disease term
6
Philadelphia-positive myelogenous leukemia
Organ
7
blood
7
bodily fluid
Life stage
6
adult
Date released
6
September, 2022
1
May, 2021
Software used
6
r
1
abc
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
assembly!
GRCh38
annotation_category!
cis-regulatory elements
Showing 7 of 7 results
table-tab-icon
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Download
FileSet
DSR923QRM
released
Annotation file set
: Target gene predictions for BSS01059 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR149JSX
released
Annotation file set
: Target gene predictions for BSS01057 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR726HNK
released
Annotation file set
: Target gene predictions for BSS01056 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR715SRR
released
Annotation file set
: Target gene predictions for BSS01039 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR264EWL
released
Annotation file set
: Target gene predictions for BSS01038 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR201QOZ
released
Annotation file set
: Target gene predictions for BSS00762 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR412LFE
released
Annotation file set
: enhancer-gene predicton of K562-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP