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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
29
RNA-seq
8
Expression arrays
6
ATAC-seq
6
ChIP-seq
1
DNase-seq
1
pCHi-C
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
cell line
1
tissue
Biosample term
64
stomach
62
heart
51
muscle of arm
49
lung
48
brain
47
kidney
46
small intestine
45
adrenal gland
43
muscle of leg
42
large intestine
42
placenta
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
34
right lung
33
thymus
32
right kidney
31
renal cortex interstitium
31
renal pelvis
30
hematopoietic multipotent progenitor cell
27
CD14-positive monocyte
27
left kidney
25
B cell
23
CD4-positive, alpha-beta memory T cell
23
spinal cord
23
spleen
22
liver
19
heart left ventricle
17
sigmoid colon
17
trophoblast cell
16
foreskin keratinocyte
15
CD8-positive, alpha-beta memory T cell
14
adipose tissue
14
body of pancreas
14
gastrocnemius medialis
14
ovary
14
thyroid gland
14
transverse colon
13
mononuclear cell
13
muscle of trunk
13
pancreas
13
psoas muscle
12
chorionic villus
12
endothelial cell of umbilical vein
12
retina
12
tibial nerve
11
Peyer's patch
11
adipocyte
11
caudate nucleus
11
endocrine pancreas
11
heart right ventricle
11
natural killer cell
11
testis
11
upper lobe of left lung
10
CD8-positive, alpha-beta T cell
10
T-helper 1 cell
10
cardiac muscle cell
10
fibroblast of lung
10
left renal cortex interstitium
10
left renal pelvis
10
neurosphere
10
regulatory T cell
10
right renal pelvis
10
skeletal muscle myoblast
9
T cell
9
breast epithelium
9
esophagus squamous epithelium
9
foreskin fibroblast
9
hepatocyte
9
layer of hippocampus
9
neural progenitor cell
9
right renal cortex interstitium
9
skeletal muscle tissue
8
CD4-positive, alpha-beta T cell
8
T-helper 17 cell
8
T-helper 2 cell
8
ascending aorta
8
coronary artery
8
dermis blood vessel endothelial cell
8
esophagus muscularis mucosa
8
fibroblast of dermis
8
lower leg skin
8
mesenchymal stem cell
8
omental fat pad
8
right atrium auricular region
8
tibial artery
7
bronchial epithelial cell
7
chorion membrane
7
epithelial cell of prostate
7
eye
7
frontal cortex
7
kidney tubule cell
7
mammary gland epithelial cell
7
osteoblast
7
parathyroid adenoma
7
prostate gland
7
substantia nigra
7
temporal lobe
7
tongue
7
trophoblast
6
T-cell
6
angular gyrus
6
aorta
6
cerebellum
6
cingulate gyrus
6
colonic mucosa
6
dendritic cell
6
duodenal mucosa
6
endodermal cell
6
esophagus
6
fibroblast of breast
6
fibroblast of cardiac tissue
6
foreskin melanocyte
6
gastroesophageal sphincter
6
globus pallidus
6
glomerular endothelial cell
6
keratinocyte
6
limb
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
putamen
6
renal cortical epithelial cell
6
skin fibroblast
6
stomach smooth muscle
6
thoracic aorta
6
urinary bladder
6
uterus
6
vagina
5
cardiac fibroblast
5
Ammon's horn
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
bipolar neuron
5
choroid plexus epithelial cell
5
epithelial cell of proximal tubule
5
hepatic stellate cell
5
kidney epithelial cell
5
kidney glomerular epithelial cell
5
left cardiac atrium
5
mammary epithelial cell
5
medulla oblongata
5
mesendoderm
5
mesodermal cell
5
midbrain
5
middle frontal gyrus
5
occipital lobe
5
pons
5
retinal pigment epithelial cell
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
5
subcutaneous abdominal adipose tissue
5
superior temporal gyrus
4
Brodmann (1909) area 46
4
CD1c-positive myeloid dendritic cell
4
astrocyte
4
brain microvascular endothelial cell
4
cerebellar cortex
4
dermis lymphatic vessel endothelial cell
4
fibroblast of mammary gland
4
fibroblast of peridontal ligament
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
glomerular visceral epithelial cell
4
iris pigment epithelial cell
4
kidney capillary endothelial cell
4
lung microvascular endothelial cell
4
muscle cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neural cell
4
neuronal stem cell
4
non-pigmented ciliary epithelial cell
4
peripheral blood mononuclear cell
4
pulmonary artery endothelial cell
4
umbilical cord
3
CD4-positive helper T cell
3
amnion
3
astrocyte of the spinal cord
3
brain pericyte
3
cardiac fibroblast
3
dermis microvascular lymphatic vessel endothelial cell
3
ectodermal cell
3
embryonic facial prominence
3
epithelial cell of esophagus
3
femur
3
fibroblast of gingiva
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
germinal matrix
3
inferior parietal cortex
3
islet precursor cell
3
mucosa of stomach
3
neuron
3
olfactory neurosphere cell line
3
right cardiac atrium
3
right lobe of liver
3
skeletal muscle satellite cell
Organ
1
pancreas
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_type!
cell line
Showing 1 of 1 results
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Download
FileSet
DSR953RQL
released
Annotation file set
: Accessible chromatin annotation for Pancreas Pancreatic islets from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP