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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
accessible chromatin
2
chromatin state
2
target gene predictions
1
gene expression
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
2
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
15
foreskin keratinocyte
11
endothelial cell of umbilical vein
8
dermis blood vessel endothelial cell
8
esophagus squamous epithelium
7
breast epithelium
6
bronchial epithelial cell
6
epithelial cell of prostate
6
keratinocyte
6
mammary gland epithelial cell
6
myoepithelial cell of mammary gland
5
hepatocyte
5
kidney tubule cell
4
dermis lymphatic vessel endothelial cell
4
lung microvascular endothelial cell
4
mammary epithelial cell
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
iris pigment epithelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
non-pigmented ciliary epithelial cell
3
pulmonary artery endothelial cell
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
2
colon epithelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epidermal melanocyte
2
epithelial cell of amnion
2
kidney capillary endothelial cell
2
luminal epithelial cell of mammary gland
1
amniotic epithelial cell
Organ
14
mammary gland
5
epithelium
5
kidney
Life stage
5
adult
Date released
4
September, 2022
1
February, 2021
Software used
2
chromhmm
2
r
1
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR417TTX
released
Annotation file set
: Candidate regulatory elements for BSS01103 kidney tubule cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR103NYS
released
Annotation file set
: Candidate regulatory elements for BSS01102 kidney tubule cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR445LQI
released
Annotation file set
: Chromatin states for BSS01103 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR507ZDK
released
Annotation file set
: Chromatin states for BSS01102 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR291WRX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE kidney tubule cell
Lab:
AMP-T2D consortium
Project:
AMP