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Schema
Citing CMDGA
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Annotation type
5
chromatin state
0
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed9
File set status
5
released
Genome assembly (visualization)
6
hg19
5
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
25
kidney
24
heart
19
brain
19
stomach
18
A549
17
muscle of arm
16
fibroblast
16
lung
16
muscle of leg
15
small intestine
14
adrenal gland
14
neural progenitor cell
14
placenta
13
common myeloid progenitor, CD34-positive
13
excitatory neuron
13
large intestine
13
left lung
13
monocyte
13
muscle of back
12
endothelial cell
11
B cell
11
heart left ventricle
11
right kidney
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
10
macrophage
10
pericyte cell
10
renal cortex interstitium
10
renal pelvis
9
CD4-positive, alpha-beta memory T cell
9
T cell
9
astrocyte
9
hepatocyte
9
left kidney
9
liver
8
smooth muscle cell
7
CD8-positive, alpha-beta memory T cell
7
left cardiac atrium
7
spinal cord
7
spleen
6
K562
6
adipose tissue
6
coronary artery
6
endothelial cell of hepatic sinusoid
6
heart right ventricle
6
mononuclear cell
6
tibial nerve
5
MCF-7
5
endothelial cell of umbilical vein
5
erythroblast
5
fibroblast of cardiac tissue
5
inhibitory neuron
5
islet of Langerhans
5
pancreas
5
pancreatic acinar cell
5
pancreatic ductal cell
5
sigmoid colon
5
skeletal muscle satellite cell
5
tibial artery
5
trophoblast cell
4
CD14-positive monocyte
4
angular gyrus
4
aorta
4
ascending aorta
4
body of pancreas
4
caudate nucleus
4
chorionic villus
4
colon epithelial cell
4
endocrine pancreas
4
foreskin keratinocyte
4
gastrocnemius medialis
4
keratinocyte
4
mammary gland epithelial cell
4
muscle of trunk
4
omental fat pad
4
osteoblast
4
ovary
4
pancreatic beta cell
4
psoas muscle
4
retina
4
right atrium auricular region
4
temporal lobe
4
thoracic aorta
4
thyroid gland
4
transverse colon
3
cardiac fibroblast
3
HeLa-S3
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
adipocyte
3
cardiac muscle cell
3
cerebellum
3
chorion membrane
3
cortical cell of adrenal gland
3
endometrium adenocarcinoma
3
enterocyte
3
fibroblast of dermis
3
fibroblast of lung
3
frontal cortex
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
luminal epithelial cell of mammary gland
3
mesenchymal stem cell
3
naive T cell
3
natural killer cell
3
neurosphere
3
pancreatic alpha cell
regulatory T cell
3
retinal pigment epithelial cell
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle fiber
3
skeletal muscle tissue
3
skin fibroblast
3
testis
3
type II pneumocyte
3
upper lobe of left lung
2
22Rv1
2
Ammon's horn
2
Brodmann (1909) area 46
2
HepG2
2
LNCaP clone FGC
2
Muller cell
2
NAMALWA cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
blood vessel smooth muscle cell
2
brain microvascular endothelial cell
2
breast epithelium
2
bronchial epithelial cell
2
cerebellar cortex
2
choroid plexus epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endocardial cell
2
endodermal cell
2
endothelial cell of lymphatic vessel
2
enteric neuron
2
enteric smooth muscle cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fetal cardiomyocyte
2
fibroblast of breast
2
foreskin fibroblast
2
gabaergic neuron
2
germinal matrix
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
glutamatergic neuron
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
limb
2
lower leg skin
2
medulla oblongata
2
mesangial cell
2
mesothelial cell
2
midbrain
2
middle frontal gyrus
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neuron
2
neutrophil
2
occipital lobe
2
oligodendrocyte precursor cell
2
pancreatic stellate cell
2
parathyroid adenoma
2
pons
2
prostate gland
2
putamen
2
renal cortical epithelial cell
2
schwann cell
2
skeletal muscle cell
2
skeletal muscle myoblast
2
smooth muscle cell of the brain vasculature
2
smooth muscle cell of the esophagus
2
stomach smooth muscle
Disease term
5
breast cancer
Organ
5
mammary gland
Life stage
5
adult
Date released
5
September, 2022
Software used
5
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
regulatory T cell
Showing 5 of 5 results
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Download
FileSet
DSR097QMG
released
Annotation file set
: Chromatin states for BSS01244 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR983KRN
released
Annotation file set
: Chromatin states for BSS01243 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR213OTC
released
Annotation file set
: Chromatin states for BSS01240 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR128LSP
released
Annotation file set
: Chromatin states for BSS01235 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR624TOZ
released
Annotation file set
: Chromatin states for BSS01226 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP