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Schema
Citing CMDGA
Clear Filters
Annotation type
3
binding sites
2
histone modifications
1
accessible chromatin
1
target gene predictions
Annotation Category
6
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
7
cell line
Biosample term
63
heart
53
HeLa-S3
52
brain
52
kidney
51
muscle of arm
49
stomach
46
lung
45
H1-hESC
45
placenta
43
large intestine
43
muscle of leg
41
muscle of back
41
small intestine
39
left lung
39
neural progenitor cell
37
thymus
34
right lung
31
renal cortex interstitium
31
renal pelvis
31
right kidney
29
CD8-positive, alpha-beta T cell
29
endothelial cell
28
adrenal gland
28
fibroblast
27
left kidney
27
spinal cord
24
monocyte
22
K562
22
macrophage
21
pericyte cell
21
smooth muscle cell
20
adipocyte
20
breast cancer cell
19
HFFc6
19
keratinocyte
18
CD14-positive monocyte
18
foreskin keratinocyte
17
B cell
17
CD4-positive, alpha-beta memory T cell
17
foreskin fibroblast
17
hepatocyte
17
trophoblast cell
16
cardiac muscle cell
15
H9
15
HepG2
15
liver
15
retinal pigment epithelial cell
14
astrocyte
14
endothelial cell of umbilical vein
14
pancreatic ductal cell
13
retina
12
EndoC_BH1
12
excitatory neuron
12
heart left ventricle
12
muscle of trunk
12
neuroblastoma cell
12
osteoblast
11
GM12878
11
T cell
11
chorionic villus
11
mesenchymal stem cell
10
Rhabdomyosarcoma
10
bronchial epithelial cell
10
embryonic stem cell
10
fibroblast of cardiac tissue
10
gastric cancer cell
10
neuronal stem cell
10
pancreatic acinar cell
10
right renal pelvis
9
common myeloid progenitor, CD34-positive
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
erythroblast
9
left renal cortex interstitium
9
left renal pelvis
9
liposarcoma
9
lymphocyte
9
mammary epithelial cell
9
neurosphere
9
regulatory T cell
9
skeletal muscle myoblast
9
skin fibroblast
9
spleen
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
IMR-90
8
choroid plexus epithelial cell
8
fibroblast cell line
8
islet of Langerhans
8
left cardiac atrium
8
mammary gland epithelial cell
8
pituitary stalk
8
trophoblast
7
CD4-positive helper T cell
7
CD4-positive, alpha-beta T cell
7
GM06990
7
GM12864
7
GM12865
7
Jurkat
7
MCF-7
7
NAMALWA cell
7
PC-9
7
SK-N-MC
7
SK-N-SH
7
T-helper 17 cell
7
esophageal adenocarcinoma
7
fibroblast of lung
7
heart right ventricle
7
mesendoderm
7
neutrophil
7
pancreatic beta cell
6
AG04449 cell
6
AG04450 cell
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Chondroid Chordoma
6
HUES8
6
MG63
6
Rh-4 cell
6
SGBS preadipocytes
6
chondrocyte
6
colon epithelial cell
6
eye
6
fibroblast of dermis
6
fibroblast of pulmonary artery
6
hESC cell
6
natural killer cell
6
neuroblastoma cell line
6
pancreas
6
pancreatic delta cell
6
skeletal muscle satellite cell
6
testis
6
tongue
5
A549
5
CD8-positive, alpha-beta memory T cell
5
CyT49
5
Daoy
5
Ewing sarcoma
5
GM08714
5
GM12891
5
GM12892
5
GM18507
5
GM19240
5
H7-hESC
5
HCT-116 cell
5
HUES6
5
NT2-D1 cell
SK-N-DZ
5
T-helper 1 cell
5
WERI-Rb-1
5
WI38
5
acute myeloid leukemia
5
chorion membrane
5
coronary artery
5
endodermal cell
5
enterocyte
5
foreskin melanocyte
5
hematopoietic multipotent progenitor cell
5
limb
5
lymphoblastoid cell line
5
osteosarcoma
5
ovary
5
pancreatic alpha cell
5
prostate cancer cell line
5
right renal cortex interstitium
5
skeletal muscle fiber
5
smooth muscle cell of the coronary artery
5
type I muscle cell
4
A673
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
COLO205
4
Caco-2 cell
4
GM12873
4
GM12875
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
HAC cell
4
HAP-1
4
HBMEC cell
4
HK-2 cell
4
HL-60
4
HS-SY-2 cell
4
HT-29
4
HUES64
4
KARPAS-422 cell
4
L1-S8
4
LNCAP
4
LoVo cell
4
MDA-MB-231 cell
4
MM.1S
4
Mantle cell lymphoma
Organ
7
mammary gland
Life stage
adult
Date released
4
February, 2021
1
June, 2020
1
May, 2021
1
October, 2022
Software used
5
macs
1
abc
1
chromhmm
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
biosample_term_name!
SK-N-DZ
relevant_life_stage!
adult
Showing 7 of 7 results
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Download
FileSet
DSR577YXQ
released
Annotation file set
: Binding sites annotation for MCF-7 (MCF-7) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR294BDQ
released
Annotation file set
: Histone modifications annotation for Breast MCF-7-LTED from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR503YQG
released
Annotation file set
: Histone modifications annotation for Breast MCF-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR120SDK
released
Annotation file set
: Binding sites annotation for Breast MCF-7-LTED from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR694FCO
released
Annotation file set
: Binding sites annotation for Breast MCF-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR249DLQ
released
Annotation file set
: enhancer-gene predicton of MCF-7-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR645VUL
released
Annotation file set
: Accessible chromatin annotation for Breast MCF-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP