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Schema
Citing CMDGA
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Annotation type
1
binding sites
1
eQTL
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
RNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
tissue
Biosample term
7
macrophage
6
lymphoblastoid cell line
3
blood cell
3
fibroblast
3
islet of Langerhans
3
monocyte
3
skin of body
2
CD4-positive helper T cell
2
MIN6
2
T cell
2
brain
2
erythroblast
2
fibroblast of lung
2
foreskin fibroblast
2
iPSC derived cell line
2
muscle
2
putamen
2
regulatory T cell
2
spinal cord
2
substantia nigra
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
BE(2)-C
1
BJ cell
1
Caco-2 cell
1
DND-41 cell
1
ECC-1
1
GM06990
1
GM08714
1
GM10847
1
GM12801
1
GM12864
1
GM12865
1
GM12872
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM15510
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
H1-hESC
1
HAC cell
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HEK293-T-REx cell
1
HFF-Myc
1
HGPS cell
1
HL-60
1
HeLa-S3
1
HepG2
1
IMR-90
1
K562
1
Leydig cell
1
MCF-7
1
MCF10A-Er-Src cell
1
NB4
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
PANC-1 cell
1
PFSK-1 cell
1
Raji cell
1
SAEC
1
SH-SY5Y cell
1
SK-N-MC
1
SK-N-SH
1
SK-N-SH_RA
1
T follicular helper cell
1
T-47D cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
U-87 MG
1
U2OS
1
WERI-Rb-1
1
WI-38 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipose tissue
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
aortic adventitial fibroblast
1
astrocyte
1
breast
1
cardiac fibroblast
1
cardiac muscle cell
1
caudate nucleus
1
cell
1
cerebellar hemisphere
1
cerebellum
1
choroid plexus epithelial cell
1
colon sigmoid
1
coronary artery
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
endothelial cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
esophageal epithelial cell
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fat cell
1
fibroblast of dermis
1
fibroblast of mammary gland
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
frontal cortex
1
glioblastoma cell
1
heart left ventricle
1
helper T cell
1
hippocampal neuron
1
hypothalamus
1
layer of hippocampus
1
liver
1
lower motor neuron
1
lung
1
mammary epithelial cell
1
mesenchymal stem cell
1
microglial cell
1
minor salivary gland
1
myotube
1
naive B cel
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
nucleus accumbens
1
osteoblast
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
prostate gland
1
renal epithelial cell
1
retinal pigment epithelial cell
1
right atrium auricular region
1
sensory neuron
1
skeletal muscle myoblast
1
small intestine
1
smooth muscle cell
1
spleen
1
stomach
1
subcutaneous adipose tissue
1
testis
1
thyroid gland
1
tibial artery
1
tibial nerve
1
transverse colon
1
type I muscle cell
1
type II muscle cell
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
1
mammary gland
1
vagina
Date released
21
September, 2022
10
February, 2021
1
January, 2022
1
June, 2020
1
March, 2024
1
May, 2021
1
October, 2022
Software used
1
chromhmm
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR577YXQ
released
Annotation file set
: Binding sites annotation for MCF-7 (MCF-7) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR221QNR
released
Annotation file set
: vagina eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP