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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
1
binding sites
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
8
ChIP-seq
DNase-seq
Available data
2
bed bed3+
2
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
126
monocyte
55
HeLa-S3
49
H1-hESC
42
neural progenitor cell
40
islet of Langerhans
36
CD8-positive, alpha-beta T cell
28
heart
28
retina
25
K562
25
brain
24
liver
22
stomach
21
A549
21
EndoC_BH1
20
breast cancer cell
20
pigmented layer of retina
19
HFFc6
19
kidney
19
lung
18
adipose tissue
18
placenta
17
adrenal gland
17
embryonic stem cell
17
epithelial cell of proximal tubule
17
small intestine
16
subcutaneous adipose tissue
15
B cell
15
hepatocyte
15
muscle of arm
15
muscle of leg
15
regulatory T cell
14
glomerular endothelial cell
14
heart left ventricle
14
thymus
13
T-helper 1 cell
13
large intestine
13
muscle of back
12
common myeloid progenitor, CD34-positive
12
coronary artery
12
hematopoietic multipotent progenitor cell
12
left lung
12
neuroblastoma cell
12
tibial nerve
11
HepG2
11
T-helper 17 cell
11
lymphoblastoid cell line
10
GM12878
10
MCF-7
10
gastric cancer cell
10
macrophage
10
progenitor cell of endocrine pancreas
10
right atrium auricular region
10
right lung
10
spinal cord
9
CD4-positive, alpha-beta memory T cell
9
Rhabdomyosarcoma
9
cardiomyocytes
9
caudate nucleus
9
cerebellum
9
diffuse intrinsic pontine glioma
9
endothelial cell
9
liposarcoma
9
omental fat pad
9
osteoblast
9
pancreatic ductal cell
9
spleen
9
substantia nigra
9
tibial artery
8
B-lymphoblastoid cell line
8
T-helper 2 cell
8
adipocyte
8
ascending aorta
8
fibroblast cell line
8
frontal cortex
8
induced pluripotent stem cell
8
keratinocyte
8
neutrophil
8
renal pelvis
8
right kidney
7
Ammon's horn
7
CD8-positive, alpha-beta memory T cell
7
H9
7
T cell
7
T-cell acute lymphoblastic leukemia
7
amygdala
7
aorta
7
body of pancreas
7
cardiac muscle cell
7
cardiomyocytes (cardiac muscle cell)
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
left kidney
7
lymphocyte
7
mature neutrophil
7
pancreas
7
putamen
7
retinal pigment epithelial cell
6
Chondroid Chordoma
6
acute myeloid leukemia
6
anterior cingulate cortex
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
endothelial cell of umbilical vein
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
natural killer cell
6
neuroblastoma cell line
6
nucleus accumbens
6
renal cortex interstitium
6
skeletal muscle myoblast
6
skeletal muscle tissue
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive, alpha-beta T cell
5
CyT49
5
Ewing sarcoma
5
GM19238
5
GM19239
5
GM19240
5
HUES8
5
SGBS preadipocytes
5
T follicular helper cell
5
bronchial epithelial cell
5
fibroblast of cardiac tissue
5
foreskin fibroblast
5
glomerular visceral epithelial cell
5
heart right ventricle
5
kidney interstitial cell
5
kidney loop of Henle thin ascending limb epithelial cell
5
mammary gland epithelial cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
osteosarcoma
5
prostate cancer cell line
5
prostate gland
5
psoas muscle
5
smooth muscle cell of the coronary artery
5
temporal lobe
5
testis
4
22Rv1
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
BE(2)-C
4
BJ cell
4
CD14-positive monocyte
4
Caco-2 cell
4
GM06990
4
GM12864
4
GM12865
4
GM12875
4
GM12891
4
GM12892
4
GM18505
4
GM19099
4
GM19193
4
HEK293
4
HL-60
4
HS-SY-2 cell
4
IMR-90
4
Jurkat
4
KARPAS-422 cell
4
Mantle cell lymphoma
4
NAMALWA cell
4
NT2-D1 cell
4
RS4-11 cell
4
Rh-4 cell
4
SK-N-MC
4
Th1 cell
4
adipose-derived stem cell
4
alternatively activated macrophage
4
aortic endothelial cell
4
choroid plexus epithelial cell
4
diffuse large B-cell lymphoma
4
endodermal cell
4
epithelial cell of prostate
4
erythroblast
4
esophageal squamous cell carcinoma
4
fibroblast
4
fibroblast of lung
4
fibroblast of villous mesenchyme
4
foreskin keratinocyte
4
gamma-delta T cell
4
mammary epithelial cell
4
mesenchymal stem cell
4
mononuclear cell
4
naive B cell
4
nephron progenitor
4
neuronal stem cell
4
ovary
4
plasma cell
4
right lobe of liver
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
4
trophoblast
Disease term
2
Burkitt lymphoma
Organ
3
blood
3
bodily fluid
Life stage
2
child
Date released
2
February, 2021
2
September, 2022
Software used
2
chromhmm
2
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type_category!
DNase-seq
Showing 4 of 4 results
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Download
FileSet
DSR057SQN
released
Annotation file set
: Chromatin states for BSS01351 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR334GJN
released
Annotation file set
: Chromatin states for BSS01350 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR241IFQ
released
Annotation file set
: Histone modifications annotation for Blood NAMALWA from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR051UHB
released
Annotation file set
: Binding sites annotation for Blood NAMALWA from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP