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Schema
Citing CMDGA
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Annotation type
4
target gene predictions
3
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ATAC-seq
1
DNase-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
10
neural progenitor cell
6
embryonic stem cell
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
3
adipocyte
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
adipose-derived stem cell
2
differentiating adipose-derived stem cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiac muscle cell
1
cardiac precursors
1
excitatory neuron
1
hippocampal neuron
1
lower motor neuron
1
neuron cell of Hypothalamus (neuron)
Organ
3
connective tissue
Date released
1
February, 2024
1
November, 2022
1
October, 2019
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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FileSet
DSR654XDX
released
Annotation file set
: Open chromatin regions that exhibit differential accessibility in the lipid-challenged adipocytes
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR161NNW
released
Annotation file set
: Accessible chromatin of ATAC-seq in a human cell model of adipocytes day 14
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR645XXX
released
Annotation file set
: Adipocyte accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP