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Schema
Citing CMDGA
Clear Filters
Annotation type
6
chromatin state
6
target gene predictions
4
accessible chromatin
4
candidate regulatory elements
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
ATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
5
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
2
cell line
2
primary cell
Biosample term
10
neural progenitor cell
7
embryonic stem cell
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
adipocyte
5
chondrocyte
3
T-cell acute lymphoblastic leukemia
3
adipose-derived stem cell
3
neuronal stem cell
2
B cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
colon adenocarcinoma
2
dermis microvascular lymphatic vessel endothelial cell
2
differentiating adipose-derived stem cell
2
foreskin keratinocyte
2
foreskin melanocyte
2
hematopoietic multipotent progenitor cell
2
iPS DF 4.7 Cell Line
2
mammary gland epithelial cell
2
mesenchymal stem cell
2
mesendoderm
2
neuroblastoma cell line
1
BICR 31
1
CD4-positive helper T cell
1
CD8-Positive T-Lymphocytes
1
CD8-positive, alpha-beta T cell
1
EAhy 926 cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
T-lymphoma cell line
1
Th1 cell
1
atypical teratoid rhabdoid tumor
1
bipolar neuron
1
cardiac muscle cell
1
cardiac precursors
1
chronic myelomonocytic leukemia
1
colorectal adenocarcinoma
1
diffuse intrinsic pontine glioma
1
diffuse large B-cell lymphoma
1
endometrial stromal cell
1
endometrial stromal tumor
1
epidermal stem cell
1
erythroid cell
1
erythroid progenitor cell
1
esophageal adenocarcinoma
1
excitatory neuron
1
fibroblast
1
hematopoietic stem cell
1
hippocampal neuron
1
lower motor neuron
1
natural killer cell
1
neuron cell of Hypothalamus (neuron)
1
olfactory neurosphere cell line
1
osteosarcoma
1
renal cell carcinoma
1
skin fibroblast
Organ
5
connective tissue
Date released
1
February, 2021
1
February, 2024
1
June, 2020
1
November, 2022
1
October, 2019
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR654XDX
released
Annotation file set
: Open chromatin regions that exhibit differential accessibility in the lipid-challenged adipocytes
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR161NNW
released
Annotation file set
: Accessible chromatin of ATAC-seq in a human cell model of adipocytes day 14
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR389QIM
released
Annotation file set
: Binding sites annotation for Adipocyte Adipocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR073DMC
released
Annotation file set
: Accessible chromatin annotation for Adipocyte Adipocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR645XXX
released
Annotation file set
: Adipocyte accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP