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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
gene expression
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
in vitro differentiated cells
2
primary cell
Biosample term
16
fibroblast
10
pericyte cell
5
osteoblast
4
fibroblast of cardiac tissue
4
pancreatic stellate cell
3
cardiac fibroblast
3
hepatic stellate cell
2
adipocyte
2
adipose tissue
2
brain pericyte
2
extracellular matrix secreting cell
2
mesangial cell
2
mesenchymal stem cell
2
omental fat pad
2
skin fibroblast
2
subcutaneous adipose tissue
1
GM23248
1
adipose-derived mesenchymal stem cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
luteal cell
1
preadipocyte
1
pulmonary interstitial fibroblast
1
stromal cell
Organ
2
connective tissue
Date released
1
February, 2024
1
November, 2021
Software used
2
macs
Lab
1
Bing Ren, UCSD
1
Stephen Parker, UMich
Project
1
AMP
1
ENCODE
RFA
1
AMP2
1
ENCODE3
biosample_type!
in vitro differentiated cells
Showing 2 of 2 results
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Download
FileSet
DSR987PCG
released
Annotation file set
: Accessible chromatin annotation of Adipocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR083CQX
released
Annotation file set
: Cell type chromatin broad peaks and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP