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Citing CMDGA
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Annotation type
4
candidate regulatory elements
3
chromatin state
2
target gene predictions
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
29
small intestine
27
large intestine
10
sigmoid colon
8
transverse colon
7
Peyer's patch
4
colonic mucosa
4
duodenal mucosa
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
2
HCT116
2
HT-29
2
SW480
1
Caco-2
1
LoVo
1
RKO
1
colon epithelial cell
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
Organ
4
connective tissue
4
intestine
4
small intestine
Life stage
4
adult
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
GM23338
Showing 4 of 4 results
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Download
FileSet
DSR599ZEA
released
Annotation file set
: Candidate regulatory elements for BSS00271 duodenal mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR126IFF
released
Annotation file set
: Candidate regulatory elements for BSS00270 duodenal mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR725LDE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE duodenal mucosa
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR037SVA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE duodenal mucosa
Lab:
AMP-T2D consortium
Project:
AMP