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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
accessible chromatin
6
chromatin state
6
target gene predictions
4
candidate regulatory elements
2
gene expression
1
binding sites
1
histone modifications
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
cell line
Biosample term
40
stomach
37
heart
lung
33
muscle of arm
29
brain
29
kidney
29
small intestine
28
adrenal gland
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
26
left lung
26
placenta
22
right lung
20
renal cortex interstitium
20
right kidney
20
thymus
19
hematopoietic multipotent progenitor cell
19
renal pelvis
18
left kidney
15
spleen
14
B cell
14
CD4-positive, alpha-beta memory T cell
14
spinal cord
13
liver
11
foreskin keratinocyte
11
heart left ventricle
10
sigmoid colon
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
body of pancreas
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
ovary
8
thyroid gland
8
transverse colon
7
CD8-positive, alpha-beta T cell
7
Peyer's patch
7
adipose tissue
7
endocrine pancreas
7
mononuclear cell
7
neurosphere
7
psoas muscle
7
testis
7
upper lobe of left lung
6
T-helper 1 cell
6
cardiac muscle cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
fibroblast of lung
6
foreskin fibroblast
6
heart right ventricle
6
layer of hippocampus
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
natural killer cell
6
retina
6
right renal pelvis
6
skeletal muscle tissue
6
tibial nerve
5
T-helper 17 cell
5
T-helper 2 cell
5
breast epithelium
5
caudate nucleus
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
neural progenitor cell
5
omental fat pad
5
pancreas
5
parathyroid adenoma
5
regulatory T cell
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
4
T cell
4
T-cell
4
adipocyte
4
angular gyrus
4
aorta
4
ascending aorta
4
bronchial epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
epithelial cell of prostate
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
mesenchymal stem cell
4
mesodermal cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
prostate gland
4
skeletal muscle myoblast
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
vagina
3
cardiac fibroblast
3
cerebellum
3
chorion membrane
3
coronary artery
3
fibroblast of cardiac tissue
3
hepatocyte
3
keratinocyte
3
kidney tubule cell
3
limb
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
3
naive T cell
3
neural cell
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
urinary bladder
3
uterus
2
Ammon's horn
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
amnion
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
bipolar neuron
2
brain microvascular endothelial cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
cerebellar cortex
2
chorion
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
ectodermal cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
femur
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
frontal cortex
2
germinal matrix
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
islet precursor cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
left cardiac atrium
2
mesendoderm
2
middle frontal area 46
2
middle frontal gyrus
2
mucosa of stomach
2
muscle cell
2
neuroepithelial stem cell
2
neuron
2
neuronal stem cell
2
non-pigmented ciliary epithelial cell
2
osteoblast
2
placental basal plate
2
pulmonary artery endothelial cell
2
putamen
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
right cardiac atrium
2
right lobe of liver
2
skeletal muscle cell
2
skeletal muscle satellite cell
2
skin fibroblast
2
smooth muscle cell
2
smooth muscle cell of the brain vasculature
2
stromal cell of bone marrow
2
subcutaneous adipose tissue
2
umbilical cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
amnion mesenchymal stem cell
1
amniotic epithelial cell
1
amniotic stem cell
Organ
4
connective tissue
Life stage
2
adult
2
unknown
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
lung
biosample_type!
cell line
Showing 4 of 4 results
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Download
FileSet
DSR611GAA
released
Annotation file set
: Candidate regulatory elements for BSS00039 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR854ZLT
released
Annotation file set
: Candidate regulatory elements for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR810TFD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR462QHF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE adipocyte
Lab:
AMP-T2D consortium
Project:
AMP