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Schema
Citing CMDGA
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Annotation type
6
accessible chromatin
5
chromatin state
4
target gene predictions
1
binding sites
1
candidate regulatory elements
1
histone modifications
1
variant allelic effects
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
18
heart
17
muscle of arm
15
lung
15
muscle of back
15
stomach
14
large intestine
14
muscle of leg
13
brain
13
kidney
13
left lung
12
placenta
12
small intestine
11
renal cortex interstitium
11
right lung
10
renal pelvis
10
right kidney
9
left kidney
9
thymus
8
adrenal gland
7
foreskin keratinocyte
7
spinal cord
6
H9
5
CD4-positive, alpha-beta memory T cell
5
cardiac muscle cell
5
foreskin fibroblast
4
WI38
4
chorionic villus
4
common myeloid progenitor, CD34-positive
4
endothelial cell of umbilical vein
4
left renal cortex interstitium
4
left renal pelvis
4
muscle of trunk
4
neurosphere
4
right renal pelvis
4
trophoblast cell
3
CD4-positive, alpha-beta T cell
3
foreskin melanocyte
3
heart left ventricle
3
mesodermal cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
retina
3
right renal cortex interstitium
2
22Rv1
2
HEK293
2
NAMALWA
2
SK-N-DZ
2
SK-N-SH
2
T-cell
2
T-helper 17 cell
2
bronchial epithelial cell
2
cardiac fibroblast
2
cardiac myoblast
2
cardiovascular progenitor cell
2
chorion
2
dermis blood vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
eye
2
heart right ventricle
2
liver
2
lung microvascular endothelial cell
2
neural cell
2
neuroepithelial stem cell
2
neuronal stem cell
2
neutrophil
2
placental basal plate
2
spleen
2
testis
2
tongue
2
trophoblast
1
A673
1
AG04449
1
AG04450
1
B cell
1
BE2C
1
BJ
1
CD14-positive monocyte
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta T cell
1
CD8-positive, alpha-beta memory T cell
1
CMK
1
D721Med
1
DND-41
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
G401
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12801
1
GM12864
1
GM12865
1
GM12873
1
GM12874
1
GM12875
1
GM13976
1
GM13977
1
GM20000
1
H1
1
H7
1
HCEC 1CT
1
HFF-Myc
1
HK-2
1
HUES48
1
HUES6
1
HUES64
1
HepG2
1
IMR-90
1
Jurkat, Clone E6-1
1
KOPT-K1
1
L1-S8
1
MG63
1
NCI-H460
1
NT2/D1
1
PC-9
1
Panc1
1
RKO
1
SJCRH30
1
SK-N-MC
1
T-helper 1 cell
1
T-helper 2 cell
1
UCSF-4
1
WERI-Rb-1
1
adipocyte
1
amnion
1
amniotic epithelial cell
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
ecto neural progenitor cell
1
ectodermal cell
1
effector memory CD4-positive, alpha-beta T cell
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
femur
1
fibroblast of gingiva
1
fibroblast of lung
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
forelimb muscle
1
germinal matrix
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hematopoietic multipotent progenitor cell
1
hepatocyte
1
hindlimb muscle
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7
1
iPS DF 6.9
1
iris pigment epithelial cell
1
islet precursor cell
1
keratinocyte
1
kidney epithelial cell
1
left cardiac atrium
1
left leg bone
1
limb
1
mammary epithelial cell
1
mesenchymal stem cell
1
mesendoderm
1
mid-neurogenesis radial glial cells
1
mononuclear cell
1
myotube
1
neural progenitor cell
1
neuron
1
non-pigmented ciliary epithelial cell
1
osteoblast
1
ovary
1
psoas muscle
1
pulmonary artery endothelial cell
1
radial glial cell
1
regulatory T cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
1
right arm bone
1
sigmoid colon
1
skeletal muscle cell
1
skeletal muscle myoblast
1
skeletal muscle tissue
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
stromal cell of bone marrow
1
umbilical cord
Organ
1
connective tissue
Life stage
adult
1
unknown
Date released
1
February, 2021
Software used
1
encode-ccres
r
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
relevant_life_stage!
adult
software_used.software.name!
r
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR810TFD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE adipocyte
Lab:
AMP-T2D consortium
Project:
AMP