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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
accessible chromatin
4
chromatin state
4
target gene predictions
1
binding sites
1
gene expression
1
histone modifications
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
Biosample term
20
heart
18
brain
16
muscle of arm
15
lung
15
muscle of leg
14
placenta
14
stomach
13
kidney
13
large intestine
13
left lung
13
muscle of back
13
small intestine
11
right lung
11
thymus
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
adrenal gland
7
spinal cord
6
left cardiac atrium
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
heart left ventricle
5
trophoblast cell
4
adipocyte
4
chorionic villus
4
foreskin keratinocyte
4
heart right ventricle
4
liver
4
muscle of trunk
4
neural progenitor cell
3
CD14-positive, CD16-negative classical monocyte
3
islet of Langerhans
3
neurosphere
3
retina
2
ESC derived cell line
2
H1-hESC
2
HepG2
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
alternatively activated macrophage
2
chorion membrane
2
endodermal cell
2
erythroblast
2
eye
2
foreskin fibroblast
2
germinal matrix
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
mature neutrophil
2
right renal cortex interstitium
2
right renal pelvis
2
skin fibroblast
2
spleen
2
tongue
2
trophoblast
1
A673
1
AG04449 cell
1
AG04450 cell
1
BE(2)-C
1
BJ cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
DND-41
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM08714
1
GM18507
1
H7-hESC
1
H9
1
HEK293
1
HEK293T
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
IMR-90
1
K562
1
MG63
1
SJCRH30
1
SK-N-MC
1
UCSF-4
1
WERI-Rb-1
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
arm bone
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
dermis blood vessel endothelial cell
1
duodenal mucosa
1
ectodermal cell
1
embryonic facial prominence
1
femur
1
fibroblast of cardiac tissue
1
fibroblast of lung
1
foreskin melanocyte
1
glomerular visceral epithelial cell
1
hepatocyte
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
islet precursor cell
1
keratinocyte
1
kidney capillary endothelial cell
1
layer of hippocampus
1
leg bone
1
lymphocyte
1
mammary epithelial cell
1
medulloblastoma
1
mesenchymal stem cell
1
mesendoderm
1
mesodermal cell
1
mid-frontal lobe
1
mucosa of rectum
1
neural cell
1
neuron
1
ovary
1
pancreas
1
psoas muscle
1
rectum smooth muscle tissue
1
sigmoid colon
1
skeletal muscle
1
skeletal muscle myoblast
1
skin of body
1
smooth muscle cell
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
1
temporal lobe
1
testis
1
umbilical cord
1
urinary bladder
1
urothelium cell line
Organ
4
connective tissue
Life stage
adult
unknown
Date released
4
August, 2017
Software used
4
chromhmm
Lab
4
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
relevant_life_stage!
unknown
adult
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP