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Annotation type
6
accessible chromatin
6
chromatin state
6
target gene predictions
2
candidate regulatory elements
1
gene expression
1
variant allelic effects
Annotation Category
1
Gene expression levels
Annotation type Category
1
snRNA-seq
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
15
monocyte
10
hepatocyte
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
8
EndoC_BH1
8
H1-hESC
7
T-helper 1 cell
7
T-helper 17 cell
7
neural progenitor cell
7
regulatory T cell
6
endothelial cell
6
pancreatic ductal cell
5
islet of Langerhans
4
endothelial cell of hepatic sinusoid
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
T Cell
3
T-helper 2 cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
hepatocyte(AFP)
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
B cell
2
T follicular helper cell
2
body of pancreas
2
cardiomyocytes (cardiac muscle cell)
2
cerebellum
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
epithelial cell of proximal tubule
2
frontal cortex
2
gamma-delta T cell
2
glomerular endothelial cell
2
heart
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
omental fat pad
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
smooth muscle cell
2
subcutaneous adipose tissue
2
tibial nerve
1
Ammon's horn
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
C1 segment of cervical spinal cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Schwann cell
1
activated pancreatic stellate cell
1
adipocyte
1
adrenal gland
1
alternatively activated macrophage
1
amygdala
1
anterior cingulate cortex
1
aorta
1
aortic valve
1
astrocyte
1
bladder
1
brain
1
breast - mammary tissue
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac precursors (cardiac muscle cell)
1
cardiac ventricle fibroblast
1
caudate nucleus
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
colon - sigmoid
1
colon - transverse
1
coronary artery
1
cytotoxic T cell
1
dendritic cell
1
diencephalon
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
excitatory neuron
1
fallopian tube
1
gastrocnemius medialis(Muscle - Skeletal)
1
glial cell
1
glomerular visceral epithelial cell
1
heart left ventricle
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
hypothalamus
1
inflammatory macrophage
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney - cortex
1
kidney - medulla
1
kidney connecting tubule epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left ventricle myocardium
1
leukocyte
1
liver
1
lower motor neuron
1
lung
1
mast cell
1
mesangial cell
1
mesenchymal cell
1
mesenchymal stem cell
1
mesenchymal stem cell of adipose
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
metanephros
1
minor salivary gland
1
mitral valve
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
Organ
1
connective tissue
Date released
February, 2021
1
February, 2024
Software used
1
deeptools
1
r
1
samtools
1
umitools
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP2
month_released!
February, 2021
Showing 1 of 1 results
table-tab-icon
matrix-icon
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP