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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
gene expression
1
variant allelic effects
0
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
in vitro differentiated cells
1
primary cell
Biosample term
55
HeLa-S3
40
H1-hESC
26
retina
25
heart
24
K562
24
kidney
24
stomach
21
monocyte
20
A549
20
pigmented layer of retina
19
CD14-positive monocyte
19
HFFc6
18
adrenal gland
18
brain
18
small intestine
17
lung
17
muscle of arm
16
muscle of leg
16
placenta
15
large intestine
15
thymus
14
common myeloid progenitor, CD34-positive
14
liver
13
B cell
13
left lung
13
muscle of back
12
right lung
11
renal pelvis
11
right kidney
10
adipose tissue
10
heart left ventricle
10
pancreas
10
pituitary stalk
10
renal cortex interstitium
10
spinal cord
10
spleen
9
CD4-positive, alpha-beta memory T cell
9
EndoC_BH1
9
GM12878
9
hepatocyte
9
left kidney
9
pancreatic beta cell
9
psoas muscle
9
regulatory T cell
8
H9
8
natural killer cell
8
pancreatic alpha cell
8
pancreatic ductal cell
8
sigmoid colon
7
CD8-positive, alpha-beta T cell
7
CD8-positive, alpha-beta memory T cell
7
MCF-7
7
endothelial cell
7
islet of Langerhans
7
lymphocyte
7
macrophage
7
osteoblast
7
ovary
7
pancreatic delta cell
6
T cell
6
T-helper 1 cell
6
coronary artery
6
endothelial cell of umbilical vein
6
gastrocnemius medialis
6
heart right ventricle
6
mononuclear cell
6
olfactory receptor cell
6
pancreatic acinar cell
6
thyroid gland
6
tibial nerve
6
transverse colon
6
trophoblast cell
5
HUES8
5
HepG2
5
T-helper 17 cell
5
T-helper 2 cell
5
body of pancreas
5
caudate nucleus
5
fibroblast of cardiac tissue
5
muscle of trunk
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
pancreatic stellate cell
5
right atrium auricular region
5
tibial artery
4
Ammon's horn
4
CyT49
4
Peyer's patch
4
aorta
4
breast epithelium
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
epithelial cell of prostate
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin fibroblast
4
foreskin keratinocyte
4
frontal cortex
4
glomerular visceral epithelial cell
4
glutamatergic neuron
4
iPSC derived cell line
4
kidney tubule cell
4
memory B cell
4
omental fat pad
4
skeletal muscle myoblast
4
testis
4
trophoblast
4
upper lobe of left lung
3
cardiac fibroblast
3
CD4-positive helper T cell
3
GM18507
3
GM19240
3
H7-hESC
3
HAP-1
3
HCT116
3
HT-29
3
IMR-90
3
Jurkat
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
U937
3
activated CD4-positive, alpha-beta T cell
3
ascending aorta
3
astrocyte
3
bronchial epithelial cell
3
cerebellum
3
choroid plexus epithelial cell
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
globus pallidus
3
glomerular endothelial cell
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
mammary gland epithelial cell
3
medulla oblongata
3
megakaryocyte
3
mesenchymal stem cell
3
midbrain
3
naive T cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neurosphere
3
neutrophil
3
occipital lobe
3
pancreatic polypeptide-secreting cell
3
plasmacytoid dendritic cell
3
pons
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle satellite cell
3
skeletal muscle tissue
3
skin fibroblast
3
smooth muscle cell
3
superior temporal gyrus
3
thoracic aorta
3
tongue
3
urinary bladder
3
uterus
2
22Rv1
2
A172
2
A673
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CD4-positive, alpha-beta T cell
2
CMK
2
Caco-2 cell
2
Caki2
2
Daoy
2
GM03348
2
GM04503
Organ
1
connective tissue
Date released
1
February, 2024
Software used
1
macs
Lab
1
Stephen Parker, UMich
Project
1
AMP
ENCODE
RFA
1
AMP2
biosample_type!
in vitro differentiated cells
award.project!
ENCODE
Showing 1 of 1 results
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Download
FileSet
DSR083CQX
released
Annotation file set
: Cell type chromatin broad peaks and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP