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Citing CMDGA
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Annotation type
6
chromatin state
4
accessible chromatin
4
candidate regulatory elements
3
target gene predictions
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
3
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
Capture-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
10
hematopoietic multipotent progenitor cell
5
neural progenitor cell
3
cardiomyocytes (cardiac muscle cell)
2
adipocyte
2
endodermal cell
2
lymphocyte of B lineage (iPSC)
2
mesenchymal stem cell
2
muscle cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
bipolar neuron
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
ectodermal cell
1
embryonic stem cell
1
hepatocyte
1
islet precursor cell
1
mesendoderm
1
mesodermal cell
1
neural cell
1
neuron
1
olfactory neurosphere cell line
1
smooth muscle cell
1
trophoblast cell
1
white adipose cell
Organ
3
connective tissue
Life stage
1
adult
1
unknown
Date released
2
September, 2022
1
September, 2023
Software used
abc
2
r
1
chicago
Lab
2
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
3
AMP
RFA
2
AMP
1
AMP2
software_used.software.name!
abc
Showing 3 of 3 results
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Download
FileSet
DSR722BWL
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of Human Mesenchymal Cell derived Adipocytes (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR339QKV
released
Annotation file set
: Target gene predictions for BSS00039 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619LYX
released
Annotation file set
: Target gene predictions for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP