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Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
1
gene expression
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
ChIP-seq
1
RNA-seq
Available data
bed bed3+
2
bed bed9
1
bigWig
1
tsv
File set status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
28
islet of Langerhans
24
heart
21
brain
21
monocyte
21
stomach
18
A549
18
lung
17
liver
16
adrenal gland
16
epithelial cell of proximal tubule
16
kidney
16
muscle of arm
16
small intestine
15
glomerular endothelial cell
15
muscle of leg
15
placenta
14
subcutaneous adipose tissue
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
12
adipose tissue
12
neural progenitor cell
12
regulatory T cell
11
T-helper 1 cell
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
right kidney
11
right lung
11
thymus
11
tibial nerve
10
B cell
10
T-helper 17 cell
10
body of pancreas
10
caudate nucleus
10
heart left ventricle
10
hepatocyte
10
pancreatic ductal cell
9
CD4-positive, alpha-beta memory T cell
9
EndoC_BH1
9
H1-hESC
9
cerebellum
9
coronary artery
9
extended pluripotent stem (EPS) cells
9
frontal cortex
9
induced pluripotent stem cell
9
left kidney
9
omental fat pad
9
progenitor cell of endocrine pancreas
9
putamen
9
renal cortex interstitium
9
renal pelvis
9
right atrium auricular region
9
substantia nigra
9
tibial artery
8
ascending aorta
8
macrophage
8
spinal cord
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
T-helper 2 cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mature neutrophil
7
pancreatic acinar cell
6
Ammon's horn
6
K562
6
T cell
6
amygdala
6
anterior cingulate cortex
6
embryonic stem cell
6
endothelial cell
6
glomerular visceral epithelial cell
6
heart right ventricle
6
hypothalamus
6
kidney interstitial cell
6
lymphoblastoid cell line
6
mononuclear cell
6
neutrophil
6
nucleus accumbens
6
ovary
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
right lobe of liver
6
skeletal muscle tissue
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
aorta
5
cerebellum (Hemisphere)
5
endothelial cell of umbilical vein
5
gastrocnemius medialis(Muscle - Skeletal)
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
mesangial cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
natural killer cell
5
pancreatic stellate cell
5
retina
5
sigmoid colon
5
temporal lobe
5
testis
5
thyroid gland
5
transverse colon
5
trophoblast cell
4
CD14-positive monocyte
4
alternatively activated macrophage
4
angular gyrus
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
foreskin keratinocyte
4
gamma-delta T cell
4
gastrocnemius medialis
4
layer of hippocampus
4
muscle of trunk
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
psoas muscle
4
right cardiac atrium
4
skeletal muscle myoblast
4
skin of body
4
vagina
4
visceral abdominal adipose tissue
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
HeLa-S3
3
Peyer's patch
3
S-shaped body
3
T follicular helper cell
3
adipocyte
3
adult endothelial progenitor cell
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
hepatic stellate cell
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
left renal cortex interstitium
3
mammary gland epithelial cell
3
memory B cell
3
mesenchymal stem cell
3
naive B cel
3
naive T cell
3
neurosphere
3
osteoblast
3
pancreas
3
pancreatic quiescent stellate cell
3
prostate gland
3
right renal cortex interstitium
3
skeletal muscle satellite cell
3
thoracic aorta
3
upper lobe of left lung
3
uterus
2
22Rv1
2
Brodmann (1909) area 46
2
KARPAS-422 cell
2
Kupffer cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
adipose-derived stem cell
2
astrocyte
2
blood
2
breast epithelium
2
bronchial epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
Organ
3
connective tissue
Life stage
2
adult
1
unknown
Date released
2
September, 2022
1
February, 2021
Software used
2
chromhmm
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
1
AMP2
files.file_type!
bed bed3+
Showing 3 of 3 results
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Download
FileSet
DSR148SNR
released
Annotation file set
: Chromatin states for BSS00039 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR379DHG
released
Annotation file set
: Chromatin states for BSS00038 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR356IFR
released
Annotation file set
: Gene expression annotation of adipocyte from abdominal and gluteo-femoral preadipocytes of GSE118500 for GSE118497
Lab:
AMP-T2D consortium
Project:
AMP