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Citing CMDGA
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Annotation type
1
gene expression
1
meQTL
Annotation Category
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
1
DNA methylation profiling by array assay
1
snRNA-seq
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
6
EndoC_BH1
2
skeletal muscle fiber
1
adipocyte
1
endothelial cell
1
glial cell
1
leukocyte
1
mesenchymal stem cell
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neural cell
1
neutrophil
1
skeletal muscle satellite cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
1
connective tissue
Life stage
1
adult
Date released
1
February, 2024
1
May, 2021
Software used
11
macs
7
r
6
chromhmm
6
encode-ccres
5
limix
4
abc
1
chicago
1
cicero
1
deeptools
1
deltasvm
1
minfi
1
qTLtools
1
samtools
1
sqtlseeker
1
umitools
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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FileSet
DSR135HUG
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 132 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP