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Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
1
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
snATAC-seq
Available data
2
bed bed9
1
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
26
hg19
3
GRCh38
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Biosample term
22
fibroblast
19
pericyte cell
8
omental fat pad
7
adipose tissue
7
subcutaneous adipose tissue
6
fibroblast of cardiac tissue
4
osteoblast
4
skin fibroblast
3
cardiac fibroblast
3
adipocyte
3
fibroblast of dermis
3
fibroblast of lung
3
hepatic stellate cell
3
mesenchymal stem cell
2
fat cell
2
fibroblast of the aortic adventitia
2
foreskin fibroblast
2
luteal cell
2
mesangial cell
2
pancreatic stellate cell
2
stromal cell
1
GM23248
1
HT1080
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
brain pericyte
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
stromal cell of bone marrow
1
visceral abdominal adipose tissue
Organ
3
connective tissue
Life stage
1
adult
1
unknown
Date released
2
September, 2022
1
November, 2021
Software used
2
chromhmm
1
macs
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
Showing 3 of 3 results
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Download
FileSet
DSR148SNR
released
Annotation file set
: Chromatin states for BSS00039 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR379DHG
released
Annotation file set
: Chromatin states for BSS00038 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR987PCG
released
Annotation file set
: Accessible chromatin annotation of Adipocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE