Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
chromatin state
1
accessible chromatin
1
gene expression
Annotation Category
5
cis-regulatory elements
1
Gene expression levels
Annotation type Category
4
ChIP-seq
1
snATAC-seq
1
snRNA-seq
Available data
5
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
4
in vitro differentiated cells
2
primary cell
Biosample term
6
adipocyte
4
mesenchymal stem cell
1
fibroblast of lung
1
subcutaneous adipose tissue
Organ
6
connective tissue
Date released
4
August, 2017
2
February, 2024
Software used
4
chromhmm
1
deeptools
1
macs
1
r
1
samtools
1
umitools
Lab
20
AMP-T2D consortium
6
Stephen Parker, UMich
4
Bing Ren, UCSD
4
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
4
AMP
2
AMP2
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
FileSet
DSR083CQX
released
Annotation file set
: Cell type chromatin broad peaks and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP