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Schema
Citing CMDGA
Clear Filters
Annotation type
target gene predictions
2
eQTL
1
gene expression
1
variant allelic effects
Annotation Category
cis-regulatory elements
3
Genetic variant effects
1
Gene expression levels
Annotation type Category
3
RNA-seq
1
DNase-seq
Available data
1
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
31
islet of Langerhans
23
monocyte
17
epithelial cell of proximal tubule
16
induced pluripotent stem cell
16
subcutaneous adipose tissue
15
endothelial cell
15
glomerular endothelial cell
15
hepatocyte
13
macrophage
12
EndoC_BH1
11
cardiomyocytes
10
liver
10
pancreatic ductal cell
9
coronary artery
9
extended pluripotent stem (EPS) cells
9
kidney
9
progenitor cell of endocrine pancreas
9
regulatory T cell
9
right atrium auricular region
9
tibial nerve
8
H1-hESC
8
T-helper 1 cell
8
T-helper 17 cell
8
adipose tissue
8
fibroblast
8
frontal cortex
8
putamen
8
tibial artery
7
body of pancreas
7
caudate nucleus
7
cerebellum
7
kidney loop of Henle thin ascending limb epithelial cell
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
neural progenitor cell
7
omental fat pad
7
pancreatic acinar cell
7
pancreatic alpha cell
7
pancreatic beta cell
7
pancreatic delta cell
7
substantia nigra
6
amygdala
6
anterior cingulate cortex
6
ascending aorta
6
cerebellum (Hemisphere)
6
glomerular visceral epithelial cell
6
hypothalamus
6
kidney interstitial cell
6
lymphoblastoid cell line
6
neutrophil
6
nucleus accumbens
6
smooth muscle cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
Ammon's horn
5
B Cell
5
C1 segment of cervical spinal cord
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
cardiac precursors (cardiac muscle cell)
5
cardiomyocytes (cardiac muscle cell)
5
gastrocnemius medialis(Muscle - Skeletal)
5
heart
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
mesangial cell
5
pancreatic stellate cell
5
right lobe of liver
4
T cell
4
T-helper 2 cell
4
bone tissue
4
brain
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endothelial cell of hepatic sinusoid
4
gamma-delta T cell
4
heart left ventricle
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
skeletal muscle fiber
4
vascular associated smooth muscle cell
4
visceral abdominal adipose tissue
3
CD8-positive, alpha-beta T cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
Schwann cell
3
T follicular helper cell
3
adipocyte
3
adult endothelial progenitor cell
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
enterocyte
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
mesenchymal stem cell
3
myofibroblast cell
3
naive B cel
3
natural killer cell
3
pancreatic polypeptide-secreting cell
3
pancreatic quiescent stellate cell
3
retina
3
skeletal muscle tissue
3
skin of body
3
smooth muscle cell of the coronary artery
3
type I muscle cell
3
type II muscle cell
2
cardiac fibroblast
2
muscle of leg
2
B cell
2
CD4-positive helper T cell
2
Kupffer cell
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
adrenal gland
2
basal cell
2
blood
2
cardiac muscle cell
2
dorsolateral prefrontal cortex
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
epithelial cell of esophagus
2
goblet cell
2
heart right ventricle
2
hepatic stellate cell
2
iPSC derived cell line
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
left cardiac atrium
2
leukocyte
2
lung
2
mast cell
2
mature natural killer cell
Organ
4
brain
Life stage
1
fetal
Date released
2
January, 2022
1
February, 2020
1
May, 2020
Software used
2
qTLtools
1
deltasvm
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
target gene predictions
annotation_category!
cis-regulatory elements
Showing 4 of 4 results
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154FEP
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267EUN
released
Annotation file set
: Gene expression levels of Brain fetal from RNA-seq (GSE63634)
Lab:
AMP-T2D consortium
Project:
AMP