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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
tissue
2
cell line
Biosample term
86
monocyte
31
CD8-positive, alpha-beta T cell
20
neural progenitor cell
19
A549
13
common myeloid progenitor, CD34-positive
11
breast cancer cell
11
hematopoietic multipotent progenitor cell
10
B cell
9
CD4-positive, alpha-beta memory T cell
9
gastric cancer cell
8
K562
8
Rhabdomyosarcoma
8
mature neutrophil
8
neuroblastoma cell
7
CD8-positive, alpha-beta memory T cell
7
HepG2
7
MCF-7
7
adipocyte
7
diffuse intrinsic pontine glioma
7
embryonic stem cell
7
esophageal adenocarcinoma
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
hESC cell
6
hepatocyte
6
keratinocyte
6
liposarcoma
6
mononuclear cell
6
neuroblastoma cell line
6
squamous cell lung carcinoma
6
trophoblast cell
5
CD14-positive, CD16-negative classical monocyte
5
T cell
5
T-cell acute lymphoblastic leukemia
5
endothelial cell of umbilical vein
5
fibroblast of cardiac tissue
5
foreskin keratinocyte
5
melanoma cell
5
natural killer cell
5
osteosarcoma
4
CD14-positive monocyte
4
alternatively activated macrophage
4
bronchial epithelial cell
4
fibroblast of lung
4
foreskin fibroblast
4
mammary epithelial cell
4
mammary gland epithelial cell
4
mesenchymal stem cell
4
regulatory T cell
4
rhabdomyosarcoma cell
4
skeletal muscle myoblast
3
22Rv1
3
CD4-positive, alpha-beta T cell
3
Ewing sarcoma
3
GM12878
3
H1-hESC
3
HeLa-S3
3
KARPAS-422 cell
3
NAMALWA cell
3
SK-N-DZ
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
acute myeloid leukemia
3
cardiac muscle cell
3
dermis lymphatic vessel endothelial cell
3
diffuse large B-cell lymphoma
3
endodermal cell
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
esophageal squamous cell carcinoma
3
fibroblast of dermis
3
glioblastoma cell
3
glioma cell
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
lymphoblast
3
lymphoblastoid cell line
3
naive T cell
3
neuronal stem cell
3
neurosphere
3
osteoblast
3
pancreatic ductal adenocarcinoma
3
skin fibroblast
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
B-lymphocyte
2
BE(2)-C
2
BJ cell
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO205
2
Caco-2 cell
2
ESC derived cell line
2
GM06990
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
GM23248
2
H7-hESC
2
HAP-1
2
HEK293
2
HK-2 cell
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HuH-7
2
IMR-90
2
JVM-2 cell
2
Jurkat
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
2
MG63
2
MM.1S
2
Mantle cell lymphoma
2
NT2-D1 cell
2
OCI-LY1
2
OCI-LY7
2
PC-3
2
PC-9
2
RPMI8226
2
RS4-11 cell
2
RWPE1
2
Rh-4 cell
2
SK-MEL-5
2
SK-N-MC
2
SK-N-SH
2
SW480
2
T47D
2
Th1 cell
2
U-266 cell
2
VCaP cell
2
WERI-Rb-1
2
Z-138
2
acute myeloid leukemia cell
2
astrocyte
2
choroid plexus epithelial cell
2
chronic lymphocytic leukemia
2
colon adenocarcinoma
2
colon carcinoma
2
dermis blood vessel endothelial cell
2
endometriosis
2
epithelial ovarian cancer cell
2
erythroblast
2
erythroid progenitor cell
2
esophageal carcinoma
2
fibroblast
2
fibroblast of breast
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
foreskin melanocyte
2
glioblastoma multiforme cancer stem cell
2
hematopoietic cell
2
iPS DF 4.7 Cell Line
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
kidney tubule cell
2
leukemic stem cell
2
lymphocyte
2
mantle cell lymphoma cell
2
medulloblastoma cell line
2
mesendoderm
2
mesodermal cell
2
metastatic melanoma
2
multiple myeloma cell line
2
muscle cell
2
myoepithelial cell of mammary gland
2
neutrophil
2
pancreatic cell line
2
pancreatic ductal cell
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
pulmonary artery endothelial cell
2
renal cell carcinoma
2
retinal pigment epithelial cell
2
skeletal muscle satellite cell
2
synovial sarcoma cell
2
tracheal epithelial cell
2
triple-negative breast cancer
2
umbilical cord mesenchymal stem cell line cell
2
urinary bladder cancer cell
2
urothelium cell line
1
143B
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
Disease term
1
colorectal adenocarcinoma
Organ
2
intestine
2
large intestine
Life stage
1
adult
Date released
1
February, 2021
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
tissue
Showing 2 of 2 results
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Download
FileSet
DSR361WKN
released
Annotation file set
: Chromatin states for BSS01682 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR480BBB
released
Annotation file set
: Histone modifications annotation for Digestive tract SW_480 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP