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Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
18
chromatin state
16
target gene predictions
3
histone modifications
2
eQTL
1
accessible chromatin
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
2
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
DNase-seq
Available data
1
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
23
retina
20
monocyte
20
pigmented layer of retina
19
islet of Langerhans
19
macrophage
18
fibroblast
17
endothelial cell
13
excitatory neuron
10
kidney
10
liver
10
neural progenitor cell
10
pericyte cell
10
smooth muscle cell
8
EndoC_BH1
8
T cell
8
astrocyte
8
pancreatic beta cell
8
retinal pigment epithelial cell
8
subcutaneous adipose tissue
7
hepatocyte
7
pancreatic acinar cell
7
pancreatic alpha cell
7
pancreatic ductal cell
6
B cell
6
adipose tissue
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
lymphoblastoid cell line
5
SGBS preadipocytes
5
adipocyte
5
chondrocyte
5
coronary artery
5
erythroblast
5
inhibitory neuron
5
pancreatic delta cell
5
regulatory T cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
CD8-positive, alpha-beta T cell
4
heart left ventricle
4
memory B cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
natural killer cell
4
omental fat pad
4
pancreas
4
pancreatic stellate cell
4
putamen
4
right atrium auricular region
4
tibial artery
4
tibial nerve
4
type I muscle cell
4
type II muscle cell
4
type II pneumocyte
3
cardiac fibroblast
3
T follicular helper cell
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
blood cell
3
brain
3
caudate nucleus
3
cerebellum
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
frontal cortex
3
gabaergic neuron
3
heart
3
mesenchymal stem cell
3
naive B cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
osteoblast
3
skin of body
3
substantia nigra
3
type I pneumocyte
2
Ammon's horn
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
adipose-derived stem cell
2
amygdala
2
anterior cingulate cortex
2
aortic endothelial cell
2
ascending aorta
2
basal cell
2
blood
2
blood vessel smooth muscle cell
2
capillary endothelial cell
2
cardiac muscle cell
2
cartilage tissue
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
gamma-delta T cell
2
glial cell
2
glomerular visceral epithelial cell
2
hepatic stellate cell
2
hypothalamus
2
iPSC derived cell line
2
keratinocyte
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesothelial cell
2
microglial cell
2
muscle
2
naive regulatory T cell
2
neuron
2
neutrophil
2
nucleus accumbens
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
pancreatic polypeptide-secreting cell
2
plasma cell
2
plasmacytoid dendritic cell
2
schwann cell
2
skeletal muscle tissue
2
smooth muscle cell of the esophagus
2
spleen
1
hindlimb muscle
1
C1 segment of cervical spinal cord
1
CD4-positive helper T cell
1
CD4-positive, alpha-beta T cell
1
HepG2
1
Leydig cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
Schwann cell
1
abdominal aorta artery
1
adrenal gland
1
alveolar macrophage
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
basal cell of epidermis
1
body of pancreas
1
brain microvascular endothelial cell
1
brain pericyte
1
breast
1
cardiac endothelial cell
1
cardiac precursors
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
cholangiocyte
1
choroid plexus epithelial cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
colon goblet cell
1
colon sigmoid
1
conventional dendritic cell
1
cortex
1
cortex of kidney
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
eccrine cell
1
endothelial cell of artery
1
endothelial cell of umbilical vein
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
epithelial cell of proximal tubule
1
erythrocyte
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
extravillous trophoblast
1
fat cell
1
fetal heart
1
fetal thymocyte
1
forelimb muscle
1
foveolar cell of stomach
1
gastric goblet cell
1
gastrocnemius medialis(Muscle - Skeletal)
1
globus pallidus
1
glomerular endothelial cell
1
goblet cell
1
granular cell of epidermis
1
heart right ventricle
1
helper T cell
1
hepatoblast
Organ
3
brain
Life stage
1
fetal
Date released
2
January, 2022
1
January, 2020
June, 2020
Software used
2
qTLtools
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
June, 2020
Showing 3 of 3 results
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271FEH
released
Annotation file set
: Accessible chromatin annotation of brain fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP