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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
18
chromatin state
16
target gene predictions
3
histone modifications
2
accessible chromatin
2
eQTL
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
2
Genetic variant effects
Annotation type Category
2
DNase-seq
2
RNA-seq
1
ChIP-seq
Available data
3
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
25
retina
23
monocyte
22
islet of Langerhans
21
macrophage
20
fibroblast
20
pigmented layer of retina
19
endothelial cell
14
neural progenitor cell
13
excitatory neuron
12
endothelial cell of hepatic sinusoid
12
kidney
12
liver
11
retinal pigment epithelial cell
10
pancreatic ductal cell
10
pericyte cell
10
smooth muscle cell
9
EndoC_BH1
9
T cell
9
breast cancer cell
9
embryonic stem cell
9
hepatocyte
9
lymphoblastoid cell line
8
B cell
8
astrocyte
8
osteoblast
8
pancreatic beta cell
8
regulatory T cell
8
subcutaneous adipose tissue
7
adipocyte
7
adipose tissue
7
erythroblast
7
fibroblast cell line
7
melanoma
7
pancreas
7
pancreatic acinar cell
7
pancreatic alpha cell
6
SGBS preadipocytes
6
chondrocyte
6
glutamatergic neuron
6
heart
6
keratinocyte
5
CD8-positive, alpha-beta T cell
5
HepG2
5
brain
5
cardiac muscle cell
5
coronary artery
5
fibroblast of cardiac tissue
5
foreskin fibroblast
5
inhibitory neuron
5
mammary epithelial cell
5
mesenchymal stem cell
5
natural killer cell
5
pancreatic delta cell
5
prostate cancer cell line
5
putamen
5
right atrium auricular region
5
skeletal muscle fiber
5
skeletal muscle satellite cell
5
spinal cord
5
tibial artery
5
tibial nerve
4
MCF-7
4
Rh-4 cell
4
T-helper 1 cell
4
acute myeloid leukemia
4
caudate nucleus
4
choroid plexus epithelial cell
4
dermal fibroblast
4
endothelial cell of umbilical vein
4
frontal cortex
4
glioblastoma multiforme cancer stem cell
4
heart left ventricle
4
hepatic stellate cell
4
mammary gland epithelial cell
4
memory B cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
neuroblastoma cell
4
neuronal stem cell
4
omental fat pad
4
pancreatic stellate cell
4
prostate gland
4
skeletal muscle myoblast
4
skin fibroblast
4
spleen
4
stomach
4
type I muscle cell
4
type II muscle cell
4
type II pneumocyte
3
cardiac fibroblast
3
A549
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
Ammon's horn
3
BE(2)-C
3
BJ cell
3
Caco-2 cell
3
ECC-1
3
GM06990
3
GM12864
3
GM12865
3
GM12878
3
GM19240
3
H1-hESC
3
HAC cell
3
HBMEC cell
3
HCT-116 cell
3
HEK293
3
HL-60
3
IMR-90
3
Jurkat
3
K562
3
NHEK
3
NT2-D1 cell
3
Normal Human Astrocytes
3
PANC-1 cell
3
RS4-11 cell
3
SAEC
3
SK-N-MC
3
SK-N-SH_RA
3
T follicular helper cell
3
T-47D cell
3
T-cell acute lymphoblastic leukemia
3
T-helper 17 cell
3
T-helper 2 cell
3
Th1 cell
3
Tumor-derived cell line
3
U-87 MG
3
U2OS
3
WERI-Rb-1
3
WI-38 cell
3
adipose-derived stem cell
3
aortic adventitial fibroblast
3
aortic endothelial cell
3
blood cell
3
bronchial epithelial cell
3
cerebellum
3
colon epithelial cell
3
cortex of kidney
3
cortical cell of adrenal gland
3
diffuse intrinsic pontine glioma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
erythroid cell
3
esophageal epithelial cell
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
gabaergic neuron
3
glial cell
3
glomerular visceral epithelial cell
3
iPSC derived cell line
3
liposarcoma
3
lung fibroblast cell line
3
midbrain
3
naive B cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
placenta
3
plasma cell
3
primordial germ cell
3
renal epithelial cell
3
skin of body
3
substantia nigra
3
synovial sarcoma cell
3
testis
3
tracheal epithelial cell
3
triple-negative breast cancer
3
type I pneumocyte
2
786-O cell
2
A-673 cell
2
B-lymphocyte
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
COLO-320 cell
2
COLO-829 cell
2
COLO205
2
D341 Med cell
2
DND-41 cell
2
Daoy
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
G-401 cell
2
GM08714
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12872
2
GM12873
2
GM12874
2
GM12875
2
GM12891
2
GM12892
2
GM13976
2
GM13977
2
GM15510
Organ
5
brain
Life stage
1
fetal
Date released
2
January, 2022
1
February, 2021
1
January, 2020
1
June, 2020
Software used
3
macs
2
qTLtools
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR133CLX
released
Annotation file set
: Binding sites annotation for Neural Fetal_brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR147QJJ
released
Annotation file set
: Accessible chromatin annotation for Neural Fetal brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271FEH
released
Annotation file set
: Accessible chromatin annotation of brain fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP