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Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
18
chromatin state
16
target gene predictions
3
histone modifications
2
accessible chromatin
2
eQTL
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
2
Genetic variant effects
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
3
RNA-seq
1
ChIP-seq
Available data
1
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
26
islet of Langerhans
20
monocyte
17
epithelial cell of proximal tubule
14
glomerular endothelial cell
14
hepatocyte
13
endothelial cell
11
cardiomyocytes
11
neural progenitor cell
11
subcutaneous adipose tissue
10
H1-hESC
10
endothelial cell of hepatic sinusoid
10
macrophage
10
progenitor cell of endocrine pancreas
10
regulatory T cell
9
EndoC_BH1
9
breast cancer cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
kidney
9
liver
8
T-helper 1 cell
8
T-helper 17 cell
8
adipose tissue
8
lymphoblastoid cell line
8
pancreatic ductal cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
melanoma
6
fibroblast cell line
6
kidney interstitial cell
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
osteoblast
5
prostate cancer cell line
4
T-helper 2 cell
4
bone tissue
4
brain
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cerebellum
4
embryonic stem cell
4
fibroblast
4
foreskin fibroblast
4
frontal cortex
4
gamma-delta T cell
4
glioblastoma multiforme cancer stem cell
4
heart
4
keratinocyte
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mammary epithelial cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
neuroblastoma cell
4
omental fat pad
4
putamen
4
right atrium auricular region
4
substantia nigra
4
tibial nerve
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
HepG2
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
MCF-7
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
T follicular helper cell
3
T-cell acute lymphoblastic leukemia
3
Transitional Principal-Intercalated Cell
3
Tumor-derived cell line
3
Vascular Smooth Muscle Cell / Pericyte
3
acute myeloid leukemia
3
adipocyte
3
adult endothelial progenitor cell
3
amygdala
3
anterior cingulate cortex
3
blood cell
3
body of pancreas
3
cardiac muscle cell
3
caudate nucleus
3
central memory CD8-positive, alpha-beta T cell
3
coronary artery
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
effector memory CD8-positive, alpha-beta T cell
3
hepatocyte(AFP)
3
hypothalamus
3
iPSC derived cell line
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
liposarcoma
3
memory B cell
3
mesenchymal stem cell
3
naive B cel
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
natural killer cell
3
neuronal stem cell
3
nucleus accumbens
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
prostate gland
3
retina
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
skin of body
3
smooth muscle cell
3
smooth muscle cell of the coronary artery
3
spinal cord
3
spleen
3
synovial sarcoma cell
3
testis
3
tibial artery
3
triple-negative breast cancer
3
visceral abdominal adipose tissue
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
B cell
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
C1 segment of cervical spinal cord
2
COLO-320 cell
2
Caco-2 cell
2
DND-41 cell
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM06990
2
GM08714
2
GM10847
2
GM12801
2
GM12864
2
GM12865
2
GM12872
2
GM12873
2
GM12874
Organ
4
brain
Life stage
1
fetal
Date released
2
January, 2022
1
February, 2020
1
February, 2021
Software used
2
qTLtools
1
macs
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
aorta
Showing 4 of 4 results
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR133CLX
released
Annotation file set
: Binding sites annotation for Neural Fetal_brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267EUN
released
Annotation file set
: Gene expression levels of Brain fetal from RNA-seq (GSE63634)
Lab:
AMP-T2D consortium
Project:
AMP