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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
18
chromatin state
16
target gene predictions
3
histone modifications
2
accessible chromatin
2
eQTL
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
3
ChIP-seq
1
RNA-seq
Available data
3
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
101
monocyte
33
CD8-positive, alpha-beta T cell
23
neural progenitor cell
12
islet of Langerhans
11
breast cancer cell
11
cardiomyocytes
10
progenitor cell of endocrine pancreas
9
H1-hESC
9
extended pluripotent stem (EPS) cells
9
gastric cancer cell
9
induced pluripotent stem cell
9
kidney
8
Rhabdomyosarcoma
8
neuroblastoma cell
8
regulatory T cell
7
T-helper 1 cell
7
T-helper 17 cell
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
hESC cell
6
kidney interstitial cell
6
liposarcoma
6
neuroblastoma cell line
6
squamous cell lung carcinoma
5
HepG2
5
T-cell acute lymphoblastic leukemia
5
melanoma cell
5
mesangial cell
5
osteosarcoma
5
subcutaneous adipose tissue
4
B cell
4
bone tissue
4
brain
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
gamma-delta T cell
4
heart
4
natural killer cell
4
nephron progenitor
4
osteoblast
4
rhabdomyosarcoma cell
3
Adaptive / Maladaptive / Repairing Fibroblast
3
B Cell
3
Classical Dendritic Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Ewing sarcoma
3
Fibroblast
3
M2 Macrophage
3
Mast Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
T Cell
3
T-helper 2 cell
3
Vascular Smooth Muscle Cell / Pericyte
3
acute myeloid leukemia
3
adipocyte
3
adipose tissue
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
cerebellum
3
diffuse large B-cell lymphoma
3
effector memory CD8-positive, alpha-beta T cell
3
embryonic stem cell
3
esophageal squamous cell carcinoma
3
glioblastoma cell
3
glioma cell
3
hepatic stellate cell
3
kidney cell
3
kidney resident macrophage
3
liver
3
lymphoblast
3
lymphoblastoid cell line
3
macrophage
3
mammary epithelial cell
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neuronal stem cell
3
pancreatic ductal adenocarcinoma
3
smooth muscle cell of the coronary artery
2
B-lymphocyte
2
COLO205
2
HS-SY-2 cell
2
Jurkat
2
Kupffer cell
2
MCF-7
2
Mantle cell lymphoma
2
RS4-11 cell
2
Rh-4 cell
2
T follicular helper cell
2
Th1 cell
2
acute myeloid leukemia cell
2
amygdala
2
astrocyte
2
body of pancreas
2
cardiac muscle cell
2
caudate nucleus
2
chronic lymphocytic leukemia
2
colon adenocarcinoma
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
endometriosis
2
epithelial ovarian cancer cell
2
erythroid progenitor cell
2
esophageal carcinoma
2
fibroblast
2
fibroblast of cardiac tissue
2
foreskin fibroblast
2
frontal cortex
2
glial cell
2
glioblastoma multiforme cancer stem cell
2
heart left ventricle
2
hematopoietic cell
2
hematopoietic multipotent progenitor cell
2
hypothalamus
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
leukemic stem cell
2
leukocyte
2
mantle cell lymphoma cell
2
mast cell
2
mature natural killer cell
2
medulloblastoma cell line
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
metastatic melanoma
2
multiple myeloma cell line
2
naive B cel
2
nucleus accumbens
2
occipital lobe
2
omental fat pad
2
pancreatic cell line
2
pancreatic stellate cell
2
placenta
2
plasma cell
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
prostate gland
2
putamen
2
retina
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
skeletal muscle tissue
2
smooth muscle cell
2
stomach
2
substantia nigra
2
synovial sarcoma cell
2
temporal lobe
2
testis
2
tibial nerve
2
triple-negative breast cancer
2
umbilical cord mesenchymal stem cell line cell
2
urinary bladder cancer cell
2
vascular associated smooth muscle cell
2
visceral abdominal adipose tissue
1
143B
1
22Rv1
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG08470 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AGS cell
1
ALL-SIL cell
1
ARH-77 cell
1
AU565 cell
1
Adipose stromal cell
1
Ammon's horn
1
AsPC-1 cell
Organ
4
brain
epithelium
3
kidney
Life stage
1
fetal
Date released
3
February, 2021
1
February, 2020
Software used
3
macs
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
epithelium
Showing 4 of 4 results
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Download
FileSet
DSR980HRA
released
Annotation file set
: Histone modifications annotation for Neural Whole_brains from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR392JNG
released
Annotation file set
: Histone modifications annotation for Neural Fetal_brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR027TQK
released
Annotation file set
: Histone modifications annotation for Neural Adult_brains from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267EUN
released
Annotation file set
: Gene expression levels of Brain fetal from RNA-seq (GSE63634)
Lab:
AMP-T2D consortium
Project:
AMP