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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
histone modifications
2
accessible chromatin
2
chromatin state
2
eQTL
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
3
bed bed3+
2
bed bed9
2
bigBed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
86
monocyte
31
CD8-positive, alpha-beta T cell
19
A549
16
neural progenitor cell
13
common myeloid progenitor, CD34-positive
11
breast cancer cell
11
hematopoietic multipotent progenitor cell
10
B cell
9
CD4-positive, alpha-beta memory T cell
9
gastric cancer cell
9
liver
8
K562
8
Rhabdomyosarcoma
8
mature neutrophil
8
neuroblastoma cell
7
CD8-positive, alpha-beta memory T cell
7
HepG2
7
MCF-7
7
adipocyte
7
diffuse intrinsic pontine glioma
7
embryonic stem cell
7
esophageal adenocarcinoma
7
heart left ventricle
7
stomach
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
adipose tissue
6
adrenal gland
6
hESC cell
6
keratinocyte
6
liposarcoma
6
mononuclear cell
6
neuroblastoma cell line
6
squamous cell lung carcinoma
6
temporal lobe
5
CD14-positive, CD16-negative classical monocyte
5
T cell
5
T-cell acute lymphoblastic leukemia
5
brain
5
caudate nucleus
5
endothelial cell of umbilical vein
5
foreskin keratinocyte
5
hepatocyte
5
kidney
5
layer of hippocampus
5
left cardiac atrium
5
melanoma cell
5
natural killer cell
5
osteosarcoma
5
sigmoid colon
5
spleen
4
CD14-positive monocyte
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
body of pancreas
4
bronchial epithelial cell
4
colonic mucosa
4
endocrine pancreas
4
fibroblast of cardiac tissue
4
fibroblast of lung
4
foreskin fibroblast
4
gastrocnemius medialis
4
heart
4
heart right ventricle
4
islet of Langerhans
4
mammary epithelial cell
4
mammary gland epithelial cell
4
pancreas
4
prostate gland
4
psoas muscle
4
regulatory T cell
4
rhabdomyosarcoma cell
4
skeletal muscle myoblast
4
skeletal muscle tissue
4
substantia nigra
4
thyroid gland
4
tibial nerve
4
transverse colon
4
upper lobe of left lung
3
22Rv1
3
CD4-positive, alpha-beta T cell
3
Ewing sarcoma
3
GM12878
3
HeLa-S3
3
KARPAS-422 cell
3
NAMALWA cell
3
Peyer's patch
3
SK-N-DZ
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
acute myeloid leukemia
3
ascending aorta
3
cerebellum
3
cingulate gyrus
3
coronary artery
3
dermis lymphatic vessel endothelial cell
3
diffuse large B-cell lymphoma
3
duodenal mucosa
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
esophageal squamous cell carcinoma
3
fibroblast of dermis
3
glioblastoma cell
3
glioma cell
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
lymphoblast
3
lymphoblastoid cell line
3
mesenchymal stem cell
3
mucosa of rectum
3
naive T cell
3
neuronal stem cell
3
osteoblast
3
ovary
3
pancreatic ductal adenocarcinoma
3
right cardiac atrium
3
small intestine
3
stomach smooth muscle
3
testis
3
thoracic aorta
3
tibial artery
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
B-lymphocyte
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO205
2
Caco-2 cell
2
ESC derived cell line
2
GM06990
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
GM23248
2
HAP-1
2
HK-2 cell
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HuH-7
2
JVM-2 cell
2
Jurkat
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
2
MG63
2
MM.1S
2
Mantle cell lymphoma
2
NT2-D1 cell
2
OCI-LY1
2
OCI-LY7
2
PC-3
2
PC-9
2
RPMI8226
2
RS4-11 cell
2
RWPE1
2
Rh-4 cell
2
SK-MEL-5
2
SK-N-MC
2
SK-N-SH
2
SW480
2
T47D
2
Th1 cell
2
U-266 cell
2
VCaP cell
2
WERI-Rb-1
2
Z-138
acute myeloid leukemia cell
2
astrocyte
2
breast epithelium
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
chronic lymphocytic leukemia
2
colon adenocarcinoma
2
colon carcinoma
2
dermis blood vessel endothelial cell
2
endometriosis
2
epithelial ovarian cancer cell
2
erythroblast
2
erythroid progenitor cell
2
esophageal carcinoma
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
fibroblast
2
fibroblast of breast
2
fibroblast of mammary gland
Organ
5
brain
Life stage
embryonic
2
fetal
Date released
3
February, 2021
1
January, 2020
1
November, 2019
Software used
3
macs
2
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
acute myeloid leukemia cell
relevant_life_stage!
embryonic
Showing 5 of 5 results
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Download
FileSet
DSR980HRA
released
Annotation file set
: Histone modifications annotation for Neural Whole_brains from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR392JNG
released
Annotation file set
: Histone modifications annotation for Neural Fetal_brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR027TQK
released
Annotation file set
: Histone modifications annotation for Neural Adult_brains from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR833MWK
released
Annotation file set
: ChromHMM 15-state model for fetal brain male from ENCODE ChIP-seq data. ROADMAP fetal brain male
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR073PLY
released
Annotation file set
: ChromHMM 15-state model for fetal brain female from ENCODE ChIP-seq data. ROADMAP fetal brain female
Lab:
AMP-T2D consortium
Project:
AMP