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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
chromatin state
Annotation Category
4
cis-regulatory elements
2
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
2
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
cell line
4
tissue
Biosample term
105
monocyte
65
heart
63
stomach
58
kidney
53
brain
50
muscle of arm
49
lung
45
small intestine
44
muscle of leg
44
placenta
43
CD8-positive, alpha-beta T cell
43
adrenal gland
42
large intestine
41
muscle of back
40
common myeloid progenitor, CD34-positive
39
left lung
35
neural progenitor cell
34
retina
34
right lung
34
thymus
32
B cell
32
hematopoietic multipotent progenitor cell
31
right kidney
30
renal cortex interstitium
30
renal pelvis
29
liver
27
left kidney
24
spleen
23
CD4-positive, alpha-beta memory T cell
23
heart left ventricle
22
spinal cord
20
pigmented layer of retina
19
endothelial cell
19
fibroblast
18
adipocyte
18
foreskin keratinocyte
18
hepatocyte
16
adipose tissue
16
sigmoid colon
16
trophoblast cell
15
CD8-positive, alpha-beta memory T cell
15
T cell
15
endothelial cell of umbilical vein
15
natural killer cell
15
pancreas
15
regulatory T cell
15
retinal pigment epithelial cell
14
foreskin fibroblast
14
mononuclear cell
13
embryonic stem cell
13
excitatory neuron
13
gastrocnemius medialis
13
islet of Langerhans
13
osteoblast
13
ovary
13
testis
13
thyroid gland
13
tibial nerve
13
transverse colon
13
upper lobe of left lung
12
CD14-positive monocyte
12
CD4-positive, alpha-beta T cell
12
T-helper 1 cell
12
astrocyte
12
body of pancreas
12
caudate nucleus
12
chorionic villus
12
endothelial cell of hepatic sinusoid
12
fibroblast of lung
12
heart right ventricle
12
layer of hippocampus
12
macrophage
12
mammary epithelial cell
12
mesenchymal stem cell
12
muscle of trunk
12
pericyte cell
12
psoas muscle
12
skeletal muscle myoblast
12
smooth muscle cell
11
Peyer's patch
11
endocrine pancreas
11
keratinocyte
11
mammary gland epithelial cell
11
pancreatic ductal cell
11
prostate gland
11
temporal lobe
10
T-helper 17 cell
10
T-helper 2 cell
10
bronchial epithelial cell
10
cardiac muscle cell
10
neurosphere
10
skeletal muscle tissue
9
coronary artery
9
erythroblast
9
esophagus squamous epithelium
9
left cardiac atrium
9
left renal cortex interstitium
9
left renal pelvis
9
mature neutrophil
9
neuronal stem cell
9
omental fat pad
9
right renal pelvis
9
skeletal muscle satellite cell
9
substantia nigra
9
tibial artery
8
T-cell acute lymphoblastic leukemia
8
angular gyrus
8
aorta
8
ascending aorta
8
breast epithelium
8
colonic mucosa
8
dermis blood vessel endothelial cell
8
esophagus muscularis mucosa
8
fibroblast of cardiac tissue
8
fibroblast of dermis
8
foreskin melanocyte
8
lower leg skin
8
neuroblastoma cell line
8
pancreatic beta cell
8
right atrium auricular region
8
right renal cortex interstitium
8
thoracic aorta
8
trophoblast
7
cerebellum
7
chorion membrane
7
cingulate gyrus
7
duodenal mucosa
7
eye
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
kidney tubule cell
7
mucosa of rectum
7
pancreatic acinar cell
7
pancreatic alpha cell
7
parathyroid adenoma
7
skin fibroblast
7
stomach smooth muscle
7
tongue
6
CD1c-positive myeloid dendritic cell
6
endodermal cell
6
epithelial cell of prostate
6
esophagus
6
fibroblast of breast
6
frontal cortex
6
gastroesophageal sphincter
6
globus pallidus
6
glutamatergic neuron
6
hepatic stellate cell
6
limb
6
mesendoderm
6
mesodermal cell
6
midbrain
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
peripheral blood mononuclear cell
6
pulmonary artery endothelial cell
6
putamen
6
subcutaneous abdominal adipose tissue
6
urinary bladder
6
vagina
5
Ammon's horn
5
CD14-positive, CD16-negative classical monocyte
5
SGBS preadipocytes
5
Th1 cell
5
chondrocyte
5
choroid plexus epithelial cell
5
epithelial cell of proximal tubule
5
glomerular endothelial cell
5
glomerular visceral epithelial cell
5
inhibitory neuron
5
kidney glomerular epithelial cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
neural cell
5
neuron
5
occipital lobe
5
pancreatic delta cell
5
renal cortical epithelial cell
5
right cardiac atrium
5
skeletal muscle fiber
5
subcutaneous adipose tissue
5
superior temporal gyrus
5
tracheal epithelial cell
5
umbilical cord
5
uterus
4
Brodmann (1909) area 46
4
T-cell
4
acute myeloid leukemia cell
4
adipose-derived stem cell
4
alternatively activated macrophage
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
bipolar neuron
4
brain microvascular endothelial cell
4
cardiac fibroblast
Organ
4
brain
Life stage
4
adult
Date released
4
September, 2022
Software used
2
chromhmm
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_type!
cell line
Showing 4 of 4 results
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Download
FileSet
DSR486CDC
released
Annotation file set
: Candidate regulatory elements for BSS01272 Brodmann (1909) area 46 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR812CKA
released
Annotation file set
: Candidate regulatory elements for BSS01271 Brodmann (1909) area 46 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR313RUC
released
Annotation file set
: Chromatin states for BSS01272 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267MBP
released
Annotation file set
: Chromatin states for BSS01271 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP